Return to main results Retrieve Phyre Job Id

Job DescriptionP18956
Confidence19.37%DateThu Jan 5 11:37:12 GMT 2012
Rank51Aligned Residues30
% Identity33%Templated1u5tb1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Vacuolar sorting protein domain
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250........ .260.......
Predicted Secondary structure 



.........




Query SS confidence 




















. . . . . . . . .








Query Sequence  GPDEFYKGTIAEQIAQEMQKN. . . . . . . . . GGLITKEDL
Query Conservation 
   

 
 

  

      .........

 

  

Alig confidence 




















.........








Template Conservation   
  


 



 
 


            
 



 

Template Sequence  LNKELFLDEIAREIYEFTLSEFKDLNSDTNYMIITLVDL
Template Known Secondary structure  SSSTTTTTTTSSS





TT
Template Predicted Secondary structure 





Template SS confidence 






































   402.......410.........420.........430.........440
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions