Job Description P18956 Confidence 100.00% Date Thu Jan 5 11:37:12 GMT 2012 Rank 5 Aligned Residues 357 % Identity 40% Template c2v36A_ PDB info PDB header:transferase Chain: A: PDB Molecule:gamma-glutamyltranspeptidase large chain; PDBTitle: crystal structure of gamma-glutamyl transferase from2 bacillus subtilis Resolution 1.85 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		V	E	E	D	V	F	H	P	V	R	A	K	Q	G	M	V	A	S	V	D	A	T	A	T	Q	V	G	V	D	I	L	K	E	G	G	N	A	V	D	A	A	V	A	V	G	Y	A	L	A	V	T	H	P	Q	A	G	N	L	G	G	G	G	F	M	L	I	R	S	.	K	N	G	N	T	T	A	I	D	F	R
Query Conservation																																																																						.
Alig confidence																																																																						.
Template Conservation
Template Sequence		S	Y	D	E	Y	K	Q	V	D	V	G	K	D	G	M	V	A	T	A	H	P	L	A	S	E	I	G	A	D	V	L	K	K	G	G	N	A	I	D	A	A	V	A	I	Q	F	A	L	N	V	T	E	P	M	M	S	G	I	G	G	G	G	F	M	M	V	Y	D	G	K	T	K	D	T	T	I	I	D	S	R
Template Known Secondary structure			G	G	G			S			.			S						S	S													T	T																		S	T	T	T		S	T	T	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		E	M	A	P	A	K	A	T	R	D	M	F	L	D	D	Q	G	N	P	D	S	.	K	K	S	L	T	S	H	L	A	S	G	T	P	G	T	V	A	G	F	S	L	A	L	D	K	Y	G	T	M	P	L	N	K	V	V	Q	P	A	F	K	L	A	R	D	G	F	I	V	N	D	A	L	A	D	D	L	K	T
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		E	R	A	P	A	G	A	T	P	D	M	F	L	D	E	N	G	K	A	I	P	F	S	E	R	V	T	K	G	T	A	V	G	V	P	G	T	L	K	G	L	E	E	A	L	D	K	W	G	T	R	S	M	K	Q	L	I	T	P	S	I	K	L	A	E	K	G	F	P	I	D	S	V	L	A	E	A	I	S	D
Template Known Secondary structure			B			T	T			T	T	T	T	B		S	S	S		B							T	T	S	G	G	G			B																S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	S	E	V	L	P	N	H	E	N	S	K	A	I	F	W	K	E	G	E	P	L	K	K	G	D	T	L	V	Q	A	N	L	A	K	S	L	E	M	I	A	E	N	G	P	D	E	F	Y	K	G	T	I	A	E	Q	I	A	Q	E	M	Q	K	N	G	G	L	I	T	K	E	D	L	A	A	Y	K	A	V
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		Y	Q	E	K	L	.	.	S	R	T	A	A	K	D	V	F	L	P	N	G	E	P	L	K	E	G	D	T	L	I	Q	K	D	L	A	K	T	F	K	L	I	R	S	K	G	T	D	A	F	Y	K	G	K	F	A	K	T	L	S	D	T	V	Q	D	F	G	G	S	M	T	E	K	D	L	E	N	Y	D	I	T
Template Known Secondary structure		T					.	.	T	T	S	T	T					S	T	T	S	S				T	T																				T					S														T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		194	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	T	P	I	S	G	D	Y	R	G	Y	Q	V	Y	S	M	P	P	P	S	S	G	G	I	H	I	V	Q	I	L	N	I	L	E	N	F	D	M	K	K	Y	G	F	G	S	A	D	A	M	Q	I	M	A	E	A	E	K	Y	A	Y	A	D	R	S	E	Y	L	G	D	P	D	F	V	K	V	P	W	Q	A
Query Conservation
Alig confidence																																												.	.
Template Conservation																																												.	.
Template Sequence		I	D	E	P	I	W	G	D	Y	Q	G	Y	Q	I	A	T	T	P	P	P	S	S	G	G	I	F	L	L	Q	M	P	K	I	L	D	H	F	N	L	S	D	V	.	.	R	S	W	E	K	Y	Q	L	L	A	E	T	M	H	L	S	Y	A	D	R	A	S	Y	A	G	D	P	E	F	V	N	V	P	L	K	G
Template Known Secondary structure											T	T								T	T		S														T	T					T	.	.	T																								S		T	T	T	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	N	K	A	Y	A	K	S	I	A	D	Q	I	D	I	N	K	A	K	P	S	S	E	I	R	P	G	K	L	A	P	Y	E	S	N	Q	T	T	H	Y	S	V	V	D	K
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		L	L	H	P	D	Y	I	K	E	R	Q	Q	L	I	N	L	D	Q	V	N	K	K	P	K	A	G	D	.	.	.	P	W	K	Y	Q	E	G	S	A	N	Y	K	Q	V	E	Q
Template Known Secondary structure														T		B	T	T	B			S	S						.	.	.	G	G	G	G	S	S	S			S	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.				.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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