 |
Job Description | P18956 | Confidence | 55.03% | Date | Thu Jan 5 11:37:12 GMT 2012 |
Rank | 32 | Aligned Residues | 80 |
% Identity | 19% | Template | c2gacD_ |
PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:glycosylasparaginase; |
PDBTitle: t152c mutant glycosylasparaginase from flavobacterium2 meningosepticum
|
Resolution | 2.10 Å |
|
 |
  |   |
392 | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | H | Y | S | V | V | D | K | D | G | N | A | V | A | V | T | Y | T | L | N | T | T | F | G | T | G | I | V | A | G | E | S | G | I | L | L | N | N | Q | M | D | D | F | S | A | K | P | G | V | P | N | V | Y | G | L | V | G | G | D | A | N | A | V | G | P | N | K | R | P | L | S | S | M | S | P | T | I | V | V | K |
Query Conservation |   |
|
|   |
|
|
|
|   |   |
|
|
|
|
|   |
|   |
|
|   |   |   |
|
|
|
|   |   |   |
|   |
|
|
|   |
|
|
|   |
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|
Template Sequence |   |
I | G | M | I | A | L | D | A | Q | G | N | L | S | G | A | C | T | T | S | G | M | A | Y | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | H | G | R | V | G | D | S | P | I | I | G | A | G | L | F | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |
|
|
| S | T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| T | T |
|
|
| S | T | T |
| T | T | T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
  |
  |   |
472 | . | . | . | . | . | . | . | 480 | . | |
. | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | K | T | W | L | V | T | G | S | . |
P | G | G | S | R | I | I | T | T | V | L | Q | M | V | V | N | S | I | D | Y | G | L | N | V | A | E | A | T | N |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|
| . |   |
|
|   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|   |
|
|   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
D | N | E | I | G | A | A | T | A | T | G | H | G | E | E | V | I | R | T | V | G | T | H | L | V | V | E | L | M | N | Q | G | R | T | P | Q | Q | A | C | K |
Template Known Secondary structure |   |
 | T | T | T |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|