Return to main results Retrieve Phyre Job Id

Job DescriptionP18956
Confidence51.08%DateThu Jan 5 11:37:12 GMT 2012
Rank34Aligned Residues81
% Identity27%Templatec1k2xB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative l-asparaginase; PDBTitle: crystal structure of putative asparaginase encoded by escherichia coli2 ybik gene
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410.........420.........430.........440.........450.........460.........470
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  TTHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVV
Query Conservation 


 



  




 
 

   



   
 


 


 
 


  
  

         
   




 




 

 
Alig confidence 
























.......................................















Template Conservation 





 
  
 








   
....................................... 








 


 
Template Sequence  TVGAVALDLDGNLAAATSTGGMTNK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LPGRVGDSPLVGAGCY
Template Known Secondary structure 

TTS




TT
.......................................
TT


STTSBTTT
Template Predicted Secondary structure 












.......................................












Template SS confidence 















































































   179180.........190.........200... ......210.........
 
   471........480. ........490.........500. ........510
Predicted Secondary structure 


.






.


Query SS confidence 










.



















.








Query Sequence  KDGKTWLVTGS. PGGSRIITTVLQMVVNSIDY. GLNVAEATN
Query Conservation    
   
  

. 

  
     


 
 
  .
     

 
Alig confidence 










.



















.








Template Conservation 

    
 
 

 

 


  

  
       
     
  
Template Sequence  ANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACE
Template Known Secondary structure 
TTS
TTTT


Template Predicted Secondary structure 











Template SS confidence 









































   220.........230.........240.........250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions