Job Description P0C8J8 Confidence 59.37% Date Thu Jan 5 11:30:06 GMT 2012 Rank 52 Aligned Residues 174 % Identity 14% Template d2glka1 SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 0.94

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	Y	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A	R	E	R	I	I	L	G	G	D	H	L	G	P	N	C	W	Q	Q	E	N	A	D	A	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	S	C	A	G	D	P	.
Query Conservation																																																																																	.
Alig confidence																				.						.	.												.	.										.																															.
Template Conservation																				.						.	.												.	.										.
Template Sequence		G	D	A	T	R	R	A	L	D	P	V	E	S	V	R	R	L	A	.	E	L	G	A	H	.	.	G	V	T	F	H	D	D	D	L	I	P	.	.	F	G	S	S	D	S	E	R	E	.	E	H	V	K	R	F	R	Q	A	L	D	D	T	G	M	K	V	P	M	A	T	T	N	L	F	T	H	P	V	F	K
Template Known Secondary structure		B			S	S														.		T	T			.	.										S		.	.	T	T								.														T		B									S	S	S	G	G	G	T
Template Predicted Secondary structure																				.						.	.												.	.										.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
					134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190										.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.	.																																																										.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																										.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	I	P	L	A	P	E	T	V	A	E	R	A	A	V	L	C	F	A	A	E	S	V	A	T	D	C	Q	R	E	Q	L	S	Y	V	I	G	T	E	V	P	V	P	G	G	E	A	S	A	I	Q	S	V	H	I	T	H	V	.	.	.	.	.	.	.	.	.	E	D	A	A	N	T	L	R	T	H	Q
Query Conservation		.	.	.																																																										.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	G	F	T	A	N	D	R	D	V	R	R	Y	A	L	R	K	T	I	R	N	I	D	L	A	V	E	L	G	A	E	T	Y	V	A	W	G	G	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	S	G	G	A	K	D	V	R	D	A	L	D	R	M	K	E	A	F	D	L	L	G
Template Known Secondary structure		T		S	T	T		S	S																					T	T		S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	G	G	G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.															.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		K	A	F	I	A	R	G	L	T	E	A	L	T	R	V	I	A	I	V	V	Q	P	G	V	E	F	D	H	S	N	I	I	H	Y	Q	P	Q	E	A	Q	P	L	A	Q	W	I	E	N	T	R	.	M	V	Y
Query Conservation																																																				.
Alig confidence													.	.	.	.	.	.																																		.
Template Conservation													.	.	.	.	.	.
Template Sequence		E	Y	V	T	S	Q	G	Y	D	I	R	.	.	.	.	.	.	F	A	I	E	P	K	P	N	E	P	R	G	D	I	L	L	P	T	V	G	H	A	L	A	F	I	E	R	L	E	R	P	E	L	Y	G	V
Template Known Secondary structure								T					.	.	.	.	.	.							S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions