Job Description P0C8J8 Confidence 72.10% Date Thu Jan 5 11:30:06 GMT 2012 Rank 37 Aligned Residues 202 % Identity 17% Template d1vyra_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 0.9

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A	R	E	R	I	I	L	G	G	D	H	L	G	P	N	C	W	Q	Q	E	N	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	P	G	L	H	S	P	E	Q	I	A	A	W	K	K	I	T	A	G	V	H	A	E	D	G	R	I	A	V	Q	L	W	H	T	G	R	I	S	H	S	S	I	Q	P	G	G	Q	A	P	V	S	A	S	A	L	N	A	N	T	R	T	S	L	R	D	E	N	G	N	A	I	R	V	D	T	T	T	P	R
Template Known Secondary structure		T			B	S	S	S																	T	T											T	T	S	S		G	G	G	S	G	G	G						S	S	S					S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
										101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.													.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure		.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	A	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	.	.	.	.	.	.	.	.	.	.	.	.	D	A	S	M	S	C	A	G	D	P	I	P	L	A	P	E	T	V	A	E	R	A	A	V	L	C	F	A	A	E	S	V	A	T	D	C	Q
Query Conservation		.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																													.	.	.
Template Sequence		A	L	E	L	D	E	I	P	G	I	V	N	D	F	R	Q	A	V	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	Q	R	T	D	Q	Y	G	G	S	V	E	.	.	.	N	R	A	R	L	V	L	E	V	V	D	A	V	C	N	E	W	S
Template Known Secondary structure					G	G	G																		T	T		S								T	T	S								T	T	T					S	T	T	S	S	S			.	.	.			T														S
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	Q	L	S	Y	V	I	G	T	E	V	P	V	P	G	G	E	A	S	A	I	Q	S	V	H	I	T	H	V	E	D	A	A	N	T	L	R	T	H	Q	K	A	F	I	A	R	G	L	T	E	A	L	T	R	V	I	A	I	V	V	Q	P	G	V	E	F	D	H	S	N	I	I	H	Y	Q	P	Q	E	A
Query Conservation
Alig confidence																		.	.	.	.	.								.	.	.	.	.																.	.	.	.	.	.	.																	.	.	.
Template Conservation																		.	.	.	.	.								.	.	.	.	.																.	.	.	.	.	.	.																	.	.	.
Template Sequence		A	D	R	I	G	I	R	V	S	P	I	G	T	F	Q	N	.	.	.	.	.	V	D	N	G	P	N	E	.	.	.	.	.	E	A	D	A	L	Y	L	I	E	E	L	A	K	R	G	.	.	.	.	.	.	.	I	A	Y	L	H	M	S	E	T	D	L	A	G	G	K	P	.	.	.	Y	S	E	A	F	R
Template Known Secondary structure		G	G	G								S	S		B	T	T	.	.	.	.	.	B				T	T		.	.	.	.	.														T	T	.	.	.	.	.	.	.		S								B	T	T	B				.	.	.
Template Predicted Secondary structure																		.	.	.	.	.								.	.	.	.	.																.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.						250	.	.	.	.	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		Q	P	L	A	Q	W	I	E	N	T	R	M	V	Y	E	A	H	S	T	D	Y	Q	T	R	T	A	Y	W	E	L	V	R	D	H	.	F	A	I	L	K	V	G	P	A	L
Query Conservation																																				.
Alig confidence															.	.	.	.					.													.
Template Conservation															.	.	.	.					.
Template Sequence		Q	K	V	R	E	R	F	H	G	V	I	I	G	.	.	.	.	A	G	A	Y	.	T	A	E	K	A	E	D	L	I	G	K	G	L	I	D	A	V	A	F	G	R	D	Y
Template Known Secondary structure										S					.	.	.	.		S	S		.											T	T	S		S					S
Template Predicted Secondary structure															.	.	.	.					.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.					300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions