Job Description P0C8J8 Confidence 45.31% Date Thu Jan 5 11:30:06 GMT 2012 Rank 67 Aligned Residues 199 % Identity 15% Template d1icpa_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.90

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	G	Y	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A	R	E	R	I	I	L	G	G	D	H	L	G	P	N	C	W	Q	Q	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	D	V	P	G	I	W	T	K	E	Q	V	E	A	W	K	P	I	V	D	A	V	H	A	K	G	G	I	F	F	C	Q	I	W	H	V	G	R	V	S	N	K	D	F	Q	P	N	G	E	D	P	I	S	C	T	D	R	G	L	T	P	Q	I	M	S	N	G	I	D	I	A	H	F	T	R	P	R	R	L
Template Known Secondary structure		S	T	T			B		S	S																	T	T											T	T	S	S		T	T	T	S	G	G	G						S	S	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
						99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.													.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	A	D	A	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	S	.	.	.	.	.	.	.	.	.	.	.	.	C	A	G	D	P	I	P	L	A	P	E	T	V	A	E	R	A	A	V	L	C	F	A	A	E	S	V	A	T	D	C	Q	R	E
Query Conservation		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																																																											.	.	.
Template Sequence		T	T	D	E	I	P	Q	I	V	N	E	F	R	V	A	A	R	N	A	I	E	A	G	F	D	G	V	E	I	H	G	A	H	G	Y	L	I	D	Q	F	M	K	D	Q	V	N	D	R	S	D	K	Y	G	G	S	L	E	.	.	.	N	R	C	R	F	A	L	E	I	V	E	A	V	A	N	E	I	G	S	D
Template Known Secondary structure			T	T	T																		T	T		S								T	T	S								T	T	T					S	T	T	S	S	S			.	.	.																			G	G
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		163	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Q	L	S	Y	V	I	.	G	T	E	V	P	V	P	G	G	E	A	S	A	I	Q	S	V	H	I	T	H	V	E	D	A	A	N	T	L	R	T	H	Q	K	A	F	I	A	R	G	L	T	E	A	L	T	R	V	I	A	I	V	V	Q	P	G	V	E	F	D	H	S	N	I	I	H	Y	Q	P	Q	E	A	Q
Query Conservation								.
Alig confidence								.														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Sequence		R	V	G	I	R	I	S	P	F	A	H	Y	N	E	A	G	D	T	N	P	.	.	.	.	.	.	.	.	.	.	.	.	T	A	L	G	L	Y	M	V	E	S	L	N	K	Y	D	L	A	Y	.	.	.	.	.	C	H	V	V	E	P	R	.	.	.	.	.	.	.	.	.	M	K	T	C	T	E	S	L	V
Template Known Secondary structure		G							T	T			T	T	T				S			.	.	.	.	.	.	.	.	.	.	.	.												G	G	G			S		.	.	.	.	.							S	.	.	.	.	.	.	.	.	.								S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.													.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.										280	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	A	Q	W	I	E	N	T	R	M	V	Y	E	A	H	S	T	D	Y	Q	T	R	T	A	Y	W	E	L	V	R	D	H	F	A	I	L	K	V	G	P	A	L
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		P	M	R	K	A	Y	K	G	T	F	I	V	.	.	.	.	A	G	G	Y	D	R	E	D	G	N	R	A	L	I	E	D	R	A	D	L	V	A	Y	G	R	L	F
Template Known Secondary structure									S					.	.	.	.		S	S												T	T	S		S					S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions