Job Description P0C8J8 Confidence 46.89% Date Thu Jan 5 11:30:06 GMT 2012 Rank 63 Aligned Residues 219 % Identity 17% Template d1gwja_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.2

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	E	A	T	S	N	Q	V	N	Q	F	G	G	Y	.	.	.	.	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A	R	E	R	I	I	L	G	G	D	H	L	G	P	N	C	W	Q	Q	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	I	S	E	A	T	N	I	S	P	T	A	R	G	Y	V	Y	T	P	G	I	W	T	D	A	Q	E	A	G	W	K	G	V	V	E	A	V	H	A	K	G	G	R	I	A	L	Q	L	W	H	V	G	R	V	S	H	E	L	V	Q	P	D	G	Q	Q	P	V	A	P	S	A	L	K	A	E	G	A	E	C
Template Known Secondary structure										S	S	G	G	G			B	T	T			B		S	S																	T	T											T	T	S			T	T	T	S	G	G	G						S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
																										99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.											.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.											.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	S	.	.	.	.	.	.	.	C	A	G	D	P	I	P	L	A	P	.	.	E	T	V	A	E	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		F	V	E	F	E	D	G	T	A	G	L	H	P	T	S	T	P	R	A	L	E	T	D	G	I	P	G	I	V	E	D	Y	R	Q	A	A	Q	R	A	K	R	A	G	F	D	M	V	E	V	H	A	A	N	A	C	L	P	N	Q	F	L	A	T	G	T	N	R	R	T	D	Q	Y	G	G	S	I	E	N	R	A
Template Known Secondary structure						T	T	S															G	G	G																		T	T		S								T	T								S	T	T	T					S	T	T	S	S	S					T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	C	F	A	A	E	S	V	A	T	D	C	Q	R	E	Q	L	S	Y	V	I	G	T	E	V	P	V	P	G	G	E	A	S	A	I	Q	S	V	H	I	T	H	V	E	D	A	A	N	T	L	R	T	H	Q	K	A	F	I	A	R	G	L	T	E	A	L	T	R	V	I	A	I	V	V	Q	P	G	V
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Sequence		R	F	P	L	E	V	V	D	A	V	A	E	V	F	G	P	E	R	V	G	I	R	L	T	P	F	L	E	L	F	G	L	T	D	D	E	.	.	.	.	.	.	.	.	.	.	.	P	E	A	M	A	F	Y	L	A	G	E	L	D	R	R	G	L	A	Y	L	.	.	.	.	.	.	H	F	N	E	P	D	W
Template Known Secondary structure																	G	G	G							T	T				T	T				S		.	.	.	.	.	.	.	.	.	.	.																T		S			.	.	.	.	.	.					S		B
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.												.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.							.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	D	H	S	N	I	I	H	Y	Q	P	Q	E	A	Q	P	L	A	Q	W	I	E	N	T	R	M	V	Y	E	A	H	S	T	D	Y	Q	T	R	T	A	Y	W	E	L	V	R	D	H	F	A	I	L	K	V	G	P	A	L
Query Conservation
Alig confidence								.	.	.																				.	.	.	.
Template Conservation								.	.	.																				.	.	.	.
Template Sequence		I	G	G	D	I	T	.	.	.	Y	P	E	G	F	R	E	Q	M	R	Q	R	F	K	G	G	L	I	Y	.	.	.	.	C	G	N	Y	D	A	G	R	A	Q	A	R	L	D	D	N	T	A	D	A	V	A	F	G	R	P	F
Template Known Secondary structure		T	T	B				.	.	.			T	T											S					.	.	.	.		S	S												T	T	S		S					S
Template Predicted Secondary structure								.	.	.																				.	.	.	.
Template SS confidence
		280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions