|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | T | L | I | A | R | H | K | A | G | E | H | I | G | I | C | S | V | C | S | A | H | P | L | V | I | E | A | A | L | A | F | D | R | N | S | T | R | K | V | L | I | E | A | T | S | N | Q | V | N | Q | F | G | G | Y | T | G | M | T | P | A | D | F | R | E | F | V | F | T | I | A | D | K | V | G | F | A | R | E |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|   |
|
|   |
|
|
|   |   |
|   |
|   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |
|   |
|
|   |   |
|   |   |   | . |   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   | . | . | . | . |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
| . | . |
Template Sequence |   |
T | K | Y | L | L | Q | D | A | Q | A | N | . |
G | Y | A | V | P | A | F | N | I | H | N | A | E | T | I | Q | A | I | L | E | V | C | S | E | M | R | S | P | V | I | L | A | G | T | P | G | T | F | K | . |
. |
. |
. |
H | I | A | . |
. |
L | E | E | I | Y | A | L | C | S | A | Y | S | T | T | Y | N | M | P | . |
. |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  | . | T |
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |
| T | T |  |  |  | . | . | . | . |  | S |
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  | . | . | . | . |  |
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | |
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
. | . | . | |
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | I | L | G | G | D | H | L | G | P | N | C | W | Q | Q | E | N | A | D | A | A | M | E | K | S | V | E | L | V | K | E | Y | V | R | A | G | F | S | K | I | H | L | D | A | S | M | S | C | A | G | D | P | I | P | L | A | P | E | T | V | A | E | R | A | A | V | L | C | F | A | A | E | S | V | A | T | D | C | Q |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
. |
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
| . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
| . |
Template Sequence |   |
. |
L | A | L | H | L | D | H | H | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | L | D | D | I | R | R | K | V | H | A | G | V | R | S | A | M | I | D | G | S | H | F | P | F | A | E | N | V | . |
. |
. |
. |
. |
. |
. |
. |
K | L | V | K | S | V | V | D | F | C | H | S | Q | D | C | S | V | . |
Template Known Secondary structure |   |
. | B |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
| T | T | S |
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  | . |
Template Predicted Secondary structure |   |
. |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
77 | . | . | 80 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
| . |
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | Q | L | S | Y | V | I | G | T | E | V | P | V | P | G | G | E | A | S | A | I | Q | S | V | H | I | T | H | V | E | D | A | A | N | T | L | R | T | H | Q | K | A | F | I | A | R | G | L | T | E | A | L | T | R | V | I | A | I | V | V | Q | P | G | V | E | F | D | H | . |
S | N | I | I | H | Y | Q | P | Q | E |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|   |   | . |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|
|
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
E | A | E | L | G | R | L | G | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | F | L | T | D | P | Q | E | A | K | R | F | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | T | G | V | D | S | L | A | V | A | I | G | T | A | H | G | L | Y | S | K | T | P | K | I | D | F | Q | R |
Template Known Secondary structure |   |
 |  |  |  | S |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | S |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
| S |  |  |  |  |
| S | S |
|
| S | S |
|
| S | S |
|
|
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
132 | . | . | . | . | . | . | . | 140 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
  |
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | P | L | A | Q | W | I | E | N | T | R | M | V | Y | E | A | H | S | T | D | Y | Q | T | R | T | A | Y | W | E | L | V | R | D | H | F | A | I | L | K | V | G | P | A | L | T | F | A | L | R | E | A | I | F | A | L | A | Q | I | E | Q | E | L | I | A | P | E | N | R | S | G | C | L | A | V | I | E | E | V | M |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |
|
|
|
|
| . | . | . |
|
|
|
|
|   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | A | E | I | R | E | V | V | D | V | P | L | V | L | . |
. |
. |
H | G | A | S | D | V | P | D | E | F | V | R | R | T | I | E | L | G | V | T | K | V | N | V | A | T | E | L | K | I | A | F | A | G | A | V | K | A | W | . |
. |
. |
. |
. |
. |
F | A | E | N | P | Q | G | N | D | P | R | Y | Y | M | R | V | G | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| S |
|  |  |  | . | . | . |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
  |
  |   |
320 | . | . | . | . | . | . | . | . | . | 330 | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | E | P | Q | Y | W | K | K | Y | Y | R |
Query Conservation |   |
  |   |   |
|   |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |   |
|   |
Template Sequence |   |
D | A | M | K | E | V | V | R | N | K | I | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
265 | . | . | . | . | 270 | . | . | . | . | . | . |
  |