Job Description P0C8J8 Confidence 24.87% Date Thu Jan 5 11:30:06 GMT 2012 Rank 108 Aligned Residues 81 % Identity 19% Template c3opbA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:swi5-dependent ho expression protein 4; PDBTitle: crystal structure of she4p Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query Sequence		W	E	L	V	R	D	H	F	A	I	L	K	V	G	P	A	L	T	F	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	A	I	F	A	L	A	Q	I	E	Q	E	L	I	A	P	E	N	R	S	G	C	L	A	V	I	E	E	V	M	L	D	E	P	Q	Y	W	K	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.																								.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		P	G	L	I	F	K	K	Y	S	A	L	N	A	I	P	F	L	F	E	L	L	P	R	S	T	P	V	D	D	N	P	D	E	Q	I	K	L	T	D	N	Y	E	A	L	L	A	L	T	N	L	.	.	.	.	.	.	A	S	S	E	T	S	D	G	E	E	V	C	K	H	I	V	S	T	K	V	Y	W	S	T
Template Known Secondary structure						S	S	S	S		S	T	T								T	S			S	S	S		S	S																						.	.	.	.	.	.					S													S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.							.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
				328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	K	Y	Y	R	T	G	F	N	D	S	L	L	D	I	R	Y	S	L	S	D	R	I	R	Y	Y	W	P	H	S	R	I	K	N	S	V	E	T	M	M	V	N	L	E	G	V	D	I	P
Query Conservation		.	.
Alig confidence		.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	N	L	M	L	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	P	L	Q	R	S	T	L	E	L	I	S	N	M	M	S	H	P	L	T
Template Known Secondary structure					G	G	G		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																T	S	G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		606	.	.	.	610	.	.	.																						.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions