Job Description P0C8J8 Confidence 20.87% Date Thu Jan 5 11:30:06 GMT 2012 Rank 131 Aligned Residues 107 % Identity 14% Template c3n2bD_ PDB info PDB header:lyase Chain: D: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of diaminopimelate2 decarboxylase (lysa) from vibrio cholerae. Resolution 1.80 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.												.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	C	S	V	C	S	A	H	P	L	V	I	E	A	A	L	A	F	D	R	N	S	T	R	K	V	L	I	E	A	T	S	N	Q	V	N	Q	F	G	G	Y	T	.	.	.	.	.	.	.	.	.	.	.	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A	R	E	R	I	I
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																																																													.	.
Template Sequence		K	I	K	C	F	N	V	E	S	E	P	E	L	Q	R	L	N	K	V	A	G	E	L	G	V	K	A	P	I	S	L	R	I	N	P	D	V	D	A	K	T	H	P	Y	I	S	T	G	L	R	D	N	K	F	G	I	T	F	D	R	A	A	Q	V	Y	R	L	A	H	S	L	P	N	L	D	.	.	V	H	G
Template Known Secondary structure		T		S						S															T									B						T	T	T											S	S		S	B		G	G	G											S	T	T			.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	D	H	L	G	P	N	C	W	Q	Q	E	N	A	D	A	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		I	D	C	.	H	I	G	S	Q	L	T	A	L	A	P	F	I	D	A	T	D	R	L	L	A	L	I	D	S	L	K	A	E	G	I	H	I	R	H	L	D
Template Known Secondary structure					.								S																					T	T
Template Predicted Secondary structure					.
Template SS confidence
		197	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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