Job Description P0C8J8 Confidence 75.05% Date Thu Jan 5 11:30:06 GMT 2012 Rank 36 Aligned Residues 144 % Identity 13% Template c3k2gA_ PDB info PDB header:resiniferatoxin binding protein Chain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides Resolution 1.80 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																							.																																							.							.	.
Query SS confidence																							.																																							.							.	.
Query Sequence		V	I	E	A	A	L	A	F	D	R	N	S	T	R	K	V	L	I	E	A	T	.	S	N	Q	V	N	Q	F	G	G	Y	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A	R	E	R	I	I	L	.	G	G	D	H	L	G	.	.	P	N	C	W	Q	Q	E	N	A	D	A
Query Conservation																							.																																							.							.	.
Alig confidence																							.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.							.	.		.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	R	G	A	A	R	A	Q	V	R	T	G	L	P	L	X	V	H	L	P	G	W	F	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	R	V	L	D	L	V	E	E	E	G	A	D	L	R	H	T	V	L	C	H	X	N	P	S	H	X	D	P	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			G	G	G							G	G	G	T	T			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.															.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	S	C	A	G	D	P	I	P	L	A	P	E	T	V	A	E	R	A	A	V	L	C	F	A	A	E	S	V	A	T	D	C	Q	R	E	Q	L	S	Y	V	I	G	T	E	V	P	V	P	G	G	E	A	S	A
Query Conservation
Alig confidence		.	.	.	.	.	.																																																					.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																																					.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	V	Y	Q	A	T	L	A	Q	R	G	A	F	L	E	F	D	X	I	G	X	D	F	F	Y	A	D	Q	G	V	Q	C	P	S	D	D	E	V	A	R	A	I	L	G	L	A	D	H	G	Y	L	D	R	.	.	.	.	.	.	I	L	L	S	H	D	V	F	V	K	X	X	L	T	R	Y
Template Known Secondary structure		.	.	.	.	.	.										T								T	T						T	T	T	T																			T	T		G	G	G	.	.	.	.	.	.									S	G	G	G	S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.																																																					.	.	.	.	.	.
Template SS confidence
								245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	S	V	H	I	T	H	V	E	D	A	A	N	T	L	R	T	H	Q	K	A	F	I	A	R	G	L	T	E	A
Query Conservation
Alig confidence		.							.	.	.	.	.	.
Template Conservation		.							.	.	.	.	.	.
Template Sequence		.	G	G	N	G	Y	A	.	.	.	.	.	.	F	V	T	K	H	F	L	P	R	L	R	R	H	G	L	D	D	A
Template Known Secondary structure		.	T	S		T	T	S	.	.	.	.	.	.													T	T
Template Predicted Secondary structure		.							.	.	.	.	.	.
Template SS confidence
			313	.	.	.	.	.							.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions