Job Description P0C8J8 Confidence 43.26% Date Thu Jan 5 11:30:06 GMT 2012 Rank 71 Aligned Residues 238 % Identity 15% Template c3gr7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dehydrogenase; PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal2 crystal form Resolution 2.30 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																	.	.																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	L	V	I	E	A	A	L	A	F	D	R	N	S	T	R	K	V	L	I	E	A	T	S	N	Q	V	N	Q	F	.	.	G	G	Y	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A	R	E	R	I	I	L	G	G	D	H	L	G	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	W	H	K	I	H	Y	P	A	R	A	V	G	Q	V	G	L	I	I	V	E	A	T	G	V	T	P	Q	G	R	I	S	E	R	D	L	G	I	W	S	D	D	H	I	A	G	L	R	E	L	V	G	L	V	K	E	H	G	A	A	I	G	I	Q	L	A	H	A	G	R	K	S	Q	V	P	G	E	I	I
Template Known Secondary structure															T	T		S									S	S	G	G	G		S	S	T	T	S				S	S	T	T															T	T											G	G	G			S	S	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
															91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.												.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.												.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	C	W	Q	Q	E	N	A	D	A	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	.	.	.	.	.	.	.	S	C	A	G	D	P	I	P	L	A	P	.	.	E	T	V	A	E	R	A	A	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		A	P	S	A	V	P	F	D	D	S	S	P	T	P	K	E	M	T	K	A	D	I	E	E	T	V	Q	A	F	Q	N	G	A	R	R	A	K	E	A	G	F	D	V	I	E	I	H	A	A	H	G	Y	L	I	N	E	F	L	S	P	L	S	N	R	R	Q	D	E	Y	G	G	S	P	E	N	R	Y	R	F	L
Template Known Secondary structure			S	S	S			S	S	T	T	S																													T		S								T	T									T	T	T					S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	A	A	E	S	V	A	T	D	C	Q	R	E	Q	L	S	Y	V	I	G	T	E	V	P	V	P	G	G	E	A	S	A	I	Q	S	V	H	I	T	H	V	E	D	A	A	N	T	L	R	T	H	Q	K	A	F	I	A	R	G	L	T	E	A	L	T	R	V	I	A	I	V	V	Q	P	G	V	E	F	D
Query Conservation
Alig confidence															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		G	E	V	I	D	A	V	R	E	V	W	D	G	.	P	L	F	V	R	I	S	A	S	D	Y	H	P	D	G	L	T	A	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	P	Y	A	K	R	M	K	E	Q	G	V	D	L	.	.	.	.	.	V	D	V	S	S	G	A	I	V	P	A	R
Template Known Secondary structure														S	.								S				S	T	T	S			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T				.	.	.	.	.								S	S
Template Predicted Secondary structure															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230															.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		H	S	N	I	I	H	Y	Q	P	Q	E	A	Q	P	L	A	Q	W	I	E	N	T	R	M	V	Y	E	A	H	S	T	D	Y	Q	T	R	T	A	Y	W	E	L	V	R	D	H	.	F	A	I	L	K	V	G	P	A	L
Query Conservation																																																.
Alig confidence																											.	.	.	.																		.
Template Conservation																											.	.	.	.
Template Sequence		M	N	V	Y	P	G	Y	Q	V	P	F	A	E	L	I	R	R	E	A	D	I	P	T	G	A	.	.	.	.	V	G	L	I	T	S	G	W	Q	A	E	E	I	L	Q	N	G	R	A	D	L	V	F	L	G	R	E	L
Template Known Secondary structure						T	T	T	T											T	T						.	.	.	.		S	S													T	T	S		S
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.					.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions