Job Description P0C8J8 Confidence 83.03% Date Thu Jan 5 11:30:06 GMT 2012 Rank 28 Aligned Residues 264 % Identity 18% Template c3b8iF_ PDB info PDB header:lyase Chain: F: PDB Molecule:pa4872 oxaloacetate decarboxylase; PDBTitle: crystal structure of oxaloacetate decarboxylase from pseudomonas2 aeruginosa (pa4872) in complex with oxalate and mg2+. Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.			.
Query SS confidence																																																									.	.			.
Query Sequence		K	T	L	I	A	R	H	K	A	G	E	H	I	G	I	C	S	V	C	S	A	H	P	L	V	I	E	A	A	L	A	F	D	R	N	S	T	R	K	V	L	I	E	A	T	S	N	Q	V	N	Q	F	G	G	Y	.	.	T	G	.	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A
Query Conservation																																																									.	.			.
Alig confidence														.	.																			.	.	.	.																				.	.			.
Template Conservation														.	.																			.	.	.	.
Template Sequence		A	M	F	R	A	L	L	D	S	S	R	C	.	.	Y	H	T	A	S	V	F	D	P	M	S	A	R	I	A	A	D	L	.	.	.	.	G	F	E	C	G	I	L	G	G	S	V	A	S	L	Q	V	L	A	A	P	D	F	A	L	I	T	L	S	E	F	V	E	Q	A	T	R	I	G	R	V	A	R	L	P
Template Known Secondary structure										S	S			.	.								S											.	.	.	.	T		S															S			S	S	S		S														T	T		S	S
Template Predicted Secondary structure														.	.																			.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		R	E	R	I	I	L	G	G	D	H	L	G	P	N	C	W	Q	Q	E	N	A	D	A	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	S	C	A	G	D	P	I	P	L	A	P	E	T	V	.	A	E	R	A	A	V	L	C	F	A	A	E	S	V	A	T
Query Conservation																																																																	.
Alig confidence		.	.	.													.	.	.	.	.	.	.	.	.	.																																.							.
Template Conservation		.	.	.													.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		.	.	.	V	I	A	D	A	D	H	G	Y	G	N	A	.	.	.	.	.	.	.	.	.	.	L	N	V	M	R	T	V	V	E	L	E	R	A	G	I	A	A	L	T	I	E	D	T	L	L	P	A	Q	F	G	R	.	K	S	T	D	L	I	C	V	E	E	G	V	G	K	I	R	A	A	L	E	A	R	V
Template Known Secondary structure		.	.	.						T	T		S	S	S		.	.	.	.	.	.	.	.	.	.														T		S							B			S			T	T		.		S			B																		S
Template Predicted Secondary structure		.	.	.													.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
					85	.	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	Q	R	E	Q	L	S	Y	V	I	G	T	E	V	P	V	P	G	G	E	A	S	A	I	Q	S	V	H	I	T	H	V	E	D	A	A	N	T	L	R	T	H	Q	K	A	F	I	A	R	G	L	T	E	A	L	T	R	V	I	A	I	V	V	Q	P	G	V	E	F	D	H	S	N	I	I	H	Y	Q	P
Query Conservation
Alig confidence				.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Sequence		D	P	.	.	.	A	L	T	I	I	A	R	T	N	A	E	L	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	V	I	Q	R	T	L	.	A	Y	Q	E	A	G	.	.	.	.	.	.	.	.	A	D	G	I	C	L	V	G	V	R	.	.	.	.	.	.	.	.	.	D	F
Template Known Secondary structure		S	T	.	.	.	T	S								T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.						T	.	.	.	.	.	.	.	.		S									.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure				.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.																	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.										.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	A	Q	P	L	A	Q	W	I	E	N	T	R	M	V	Y	E	A	H	S	T	D	Y	Q	T	R	T	A	Y	W	E	L	V	R	D	H	F	A	I	L	K	V	G	P	A	L	T	F	A	L	R	E	A	I	F	A	L	A	Q	I	E	Q	E	L	I	A	P	E	N	R	S	G	C	L	A	V	I	E	E
Query Conservation
Alig confidence																										.	.	.																					.	.	.																.
Template Conservation																										.	.	.																					.	.	.																.
Template Sequence		A	H	L	E	A	I	A	E	H	L	H	I	P	L	M	L	V	T	Y	G	N	P	Q	L	.	.	.	R	D	D	A	R	L	A	R	L	G	V	R	V	V	V	N	G	H	A	A	.	.	.	Y	F	A	A	I	K	A	T	Y	D	C	L	R	E	E	.	R	G	A	V	A	S	D	L	T	A	S	E	L	S
Template Known Secondary structure									T	T			S							T	T		G	G	G	.	.	.									T	T								S			.	.	.																.		T					S
Template Predicted Secondary structure																										.	.	.																					.	.	.																.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	L	D	E	P	Q	Y	W	K	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	Y	T	F	P	E	E	Y	Q	A	W
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions