Job Description P0C8J8 Confidence 89.45% Date Thu Jan 5 11:30:06 GMT 2012 Rank 22 Aligned Residues 231 % Identity 17% Template c2ze3A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dfa0005; PDBTitle: crystal structure of dfa0005 complexed with alpha-ketoglutarate: a2 novel member of the icl/pepm superfamily from alkali-tolerant3 deinococcus ficus Resolution 1.65 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																														.	.	.																																		.	.	.
Query SS confidence																														.	.	.																																		.	.	.
Query Sequence		A	A	L	A	F	D	R	N	S	T	R	K	V	L	I	E	A	T	S	N	Q	V	N	Q	F	G	G	Y	.	.	.	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A	R	E	R	I	I	L	G	G	D	H	L	.	.	.	G	P	N	C	W	Q	Q	E	N	A	D	A	A
Query Conservation																														.	.	.																																		.	.	.
Alig confidence																											.			.	.	.																							.	.	.									.	.	.			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																												.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	A	R	L	L	E	A	A	G	F	T	A	I	G	T	T	S	A	G	I	A	H	A	R	.	G	R	T	D	G	Q	T	L	T	R	D	E	M	G	R	E	V	E	A	I	V	R	A	V	A	I	P	.	.	.	V	N	A	D	I	E	A	G	Y	G	H	A	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T		S													S	.				S	S	S	S	S																	S	S		.	.	.						T	T		S	S	S	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.																												.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	S	C	A	G	D	P	I	P	L	A	P	E	T	V	A	E	R	A	A	V	L	C	F	A	A	E	S	V	A	T	D	C	Q	R	E	Q	L	S	Y	V	I	G	T	E	V	P	V	P	G	G	E	A	S	A	I
Query Conservation
Alig confidence		.																								.	.												.	.	.																		.																						.
Template Conservation		.																								.	.												.	.	.																		.																						.
Template Sequence		.	E	D	V	R	R	T	V	E	H	F	A	A	L	G	V	A	G	V	N	L	E	D	A	.	.	T	G	L	T	P	T	E	L	Y	D	L	.	.	.	D	S	Q	L	R	R	I	E	A	A	R	A	A	I	D	A	S	.	G	V	P	V	F	L	N	A	R	T	D	T	F	L	K	G	H	G	A	T	D	.
Template Known Secondary structure		.													T	T		S							B	.	.		S	S	S	S	S		B				.	.	.																		.	T	S										T	T	T	T	T		S	S	S		.
Template Predicted Secondary structure		.																								.	.												.	.	.																		.																						.
Template SS confidence
			92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	V	H	I	T	H	V	E	D	A	A	N	T	L	R	T	H	Q	K	A	F	I	A	R	G	L	T	E	A	L	T	R	V	I	A	I	V	V	Q	P	G	V	E	F	D	H	S	N	I	I	H	Y	Q	P	Q	E	A	Q	P	L	A	Q	W	I	E	N	T	R	M	V	Y	E	A	H	S	T	D	Y	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.													.							.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.																										.	.
Template Conservation		.	.	.	.	.	.	.													.							.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		.	.	.	.	.	.	.	E	E	R	L	A	E	T	V	R	R	G	Q	.	A	Y	A	D	A	G	.	.	.	.	.	.	.	.	A	D	G	I	F	V	P	L	A	L	.	.	.	.	.	.	.	.	.	Q	S	Q	D	I	R	A	L	A	D	A	L	R	V	P	L	N	V	M	A	F	P	G	S	P	.	.
Template Known Secondary structure		.	.	.	.	.	.	.													.					T	T	.	.	.	.	.	.	.	.		S					T	T			.	.	.	.	.	.	.	.	.													S	S								T	T	S		.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.													.							.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
									164	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.										.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	A	Y	W	E	L	V	R	D	H	F	A	I	L	K	V	G	P	A	L	T	F	A	L	R	E	A	I	F	A	L	A	Q	I	E	Q	E	L	I	A	P	E	N	R	S	G	C	L	A	V	I
Query Conservation
Alig confidence		.	.	.																				.	.	.
Template Conservation		.	.	.																				.	.	.
Template Sequence		.	.	.	V	P	R	A	L	L	D	A	G	A	A	R	V	S	F	G	Q	S	L	.	.	.	M	L	A	T	L	G	L	V	Q	R	M	A	A	E	L	H	A	A	E	Q	S	P	L	M	D	S	Y	F
Template Known Secondary structure		.	.	.								T	T		S					T	T			.	.	.																			S
Template Predicted Secondary structure		.	.	.																				.	.	.
Template SS confidence
					217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions