Job Description P0C8J8 Confidence 29.91% Date Thu Jan 5 11:30:06 GMT 2012 Rank 96 Aligned Residues 116 % Identity 10% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.										.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		K	T	L	I	A	R	H	K	A	G	E	H	I	G	I	C	S	V	C	S	A	.	.	.	.	.	.	.	.	.	H	P	L	V	I	E	A	A	L	A	F	D	R	N	S	T	R	K	V	L	I	E	A	T	S	N	Q	V	N	Q	F	G	G	Y	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.
Template Sequence		S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	P	V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S	L	G	C	H	E	V	S	L	G	D	T	.	.	.	.	.	.	.	.	I	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L
Template Known Secondary structure											T	T										S	S			T	T	T																			T		S							T	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		73	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure					.																																																										.	.	.	.	.	.	.
Query SS confidence					.																																																										.	.	.	.	.	.	.
Query Sequence		D	K	V	.	G	F	A	R	E	R	I	I	L	G	G	D	H	L	G	P	N	C	W	Q	Q	E	N	A	D	A	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	S	C	A	G	D	.	.	.	.	.	.	.	P	I	P	L	A	P	E	T	V	A	E
Query Conservation					.																																																										.	.	.	.	.	.	.
Alig confidence					.						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.												.	.	.	.	.	.	.
Template Conservation											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		A	I	A	P	A	H	S	L	A	.	G	H	Y	H	D	T	G	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	D	N	I	R	V	S	L	E	K	G	L	R	.	.	V	F	D	A	S	V	G	G	L	G	G	C	P	F	A	P	G	A	K	G	N	V	D	T	V	A	V	V	E
Template Known Secondary structure		T	T	S		G	G	G			.				B		T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T			.	.					B	T	T			S		B	T	T	B	T	T	S			B		B
Template Predicted Secondary structure											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.																.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions