Job Description P0C8J8 Confidence 94.79% Date Thu Jan 5 11:30:06 GMT 2012 Rank 14 Aligned Residues 172 % Identity 13% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		M	K	T	L	I	A	R	H	K	A	G	E	H	I	G	I	C	S	V	C	S	A	.	.	.	.	.	H	P	L	V	I	E	A	A	L	A	F	D	R	N	S	T	R	K	V	L	I	E	A	T	S	N	Q	V	N	Q	F	G	G	Y	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.
Template Sequence		M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	C	Y	T	I	S	P	V	H	T	V	E	G	Y	V	K	L	A	G	Q	L	L	D	M	G	A	D	S	I	A	L	K	D	M	.	.	.	.	.	.	.	.	A	A	L	L	K	P	Q	P	A	Y	D	I	I	K	A	I	K	D	T	Y
Template Known Secondary structure												T	T													T	T																T	T		S							T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
				76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	F	A	R	E	R	I	I	L	G	G	D	H	L	G	P	N	C	W	Q	Q	E	N	A	D	A	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	S	C	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	I	P	L	A	P
Query Conservation		.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		G	Q	K	T	Q	I	N	.	L	H	C	H	S	T	T	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	V	S	L	M	K	A	I	E	A	G	V	D	.	.	V	V	D	T	A	I	S	S	M	S	L	G	P	G	H	N	P	T	E	S	V	A	E	M	L	E	G	T	G	Y	T	T
Template Known Secondary structure			T	T					.				B		T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		S	.	.					B		G	G	G		S	T	T	S	B		B							T	T	T	T	T	T
Template Predicted Secondary structure									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		207	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.																.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		E	T	V	A	E	R	A	A	V	L	C	F	A	A	E	S	V	A	T	D	C	Q	R	E	Q	L	S	Y	V	I	G	T	E	V	.	.	.	P	V	P	G	G	E	A	S	A	I	Q	S	V	H	I	T	H	V	E	D	A	A	N	T	L	R	T	H	Q	K	A	F	I	A	R	G	L	T	E	A	L	T	R
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	D	Y	D	R	L	H	K	I	R	D	H	F	K	A	I	R	P	K	Y	K	K	F	E	S	K	T	L	V	D	T	S	I	F	K	S	Q	I	P	G	G	M	L	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	S	Q	L	R	A	Q	G	A	E	D	K	M	D	E
Template Known Secondary structure																			G	G	G	G	G	G	G			S		S				T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T			T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		216
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		331

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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