Job Description P0C8J8 Confidence 86.84% Date Thu Jan 5 11:30:06 GMT 2012 Rank 24 Aligned Residues 215 % Identity 14% Template c1ps9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: the crystal structure and reaction mechanism of e. coli 2,4-2 dienoyl coa reductase Resolution 2.20 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																				.	.	.	.
Predicted Secondary structure																	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	E	A	T	S	N	Q	V	N	Q	F	G	G	Y	.	.	.	.	T	G	M	T	P	A	D	F	R	E	F	V	F	T	I	A	D	K	V	G	F	A	R	E	R	I	I	L	G	G	D	H	L	G	P	N	C	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	E	N
Query Conservation																	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	V	S	G	G	I	A	P	D	L	T	G	V	G	M	E	G	G	A	M	L	N	D	A	S	Q	I	P	H	H	R	T	I	T	E	A	V	H	Q	E	G	G	K	I	A	L	Q	I	L	H	T	G	R	Y	S	Y	Q	P	H	L	V	A	P	S	A	L	Q	A	P	I	N	R	F	V	P	H	E	L	S
Template Known Secondary structure									B	S	S	S	T	T		S	B	T	T			B			S	G	G	G														T	T											G	G	G	S	B	S	T	T				S	S	S				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		99	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure					.	.	.																												.	.	.	.	.	.	.									.	.	.	.	.																											.
Query SS confidence					.	.	.																												.	.	.	.	.	.	.									.	.	.	.	.																											.
Query Sequence		A	D	A	.	.	.	A	M	E	K	S	V	E	L	V	K	E	Y	V	R	A	G	F	S	K	I	H	L	D	A	S	M	S	.	.	.	.	.	.	.	C	A	G	D	P	I	P	L	.	.	.	.	.	A	P	E	T	V	A	E	R	A	A	V	L	C	F	A	A	E	S	V	A	T	D	C	Q	R	E	.
Query Conservation					.	.	.																												.	.	.	.	.	.	.									.	.	.	.	.																											.
Alig confidence					.	.	.																												.	.	.	.	.	.	.									.	.	.	.	.				.	.	.																					.
Template Conservation																																																										.	.	.
Template Sequence		H	E	E	I	L	Q	L	I	D	N	F	A	R	C	A	Q	L	A	R	E	A	G	Y	D	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	.	.	.	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	R	V	G	N	D	F
Template Known Secondary structure																						T	T		S								B	T	S								T	T	T					S	T	T	S	S	S			.	.	.																			S	S	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.							.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.
Query Sequence		Q	L	S	Y	V	I	G	T	E	V	P	V	P	G	G	E	A	S	A	I	Q	S	V	H	I	T	H	V	E	D	A	A	N	T	L	R	T	H	Q	K	A	F	I	A	R	G	L	T	E	A	L	T	R	V	I	A	I	V	V	Q	P	G	V	E	F	D	H	S	N	I	I	H	.	.	.	.	.	.	Y	Q
Query Conservation																																																																										.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		I	I	I	Y	R	L	S	M	L	D	L	V	E	D	G	G	T	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	.	.	.	.	.	.	.	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F
Template Known Secondary structure													S	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.													T		S		.	.	.	.	.	.	.							B	T	T		S	S		S	S	S	T	T	S		T	T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.															.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.								.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		P	Q	E	A	Q	P	L	A	Q	W	I	E	N	T	R	M	V	Y	E	A	H	S	T	D	Y	Q	T	R	T	A	Y	W	E	L	V	R	D	H	.	F	A	I	L	K	V	G	P	A	L
Query Conservation																																								.
Alig confidence																			.	.	.	.																		.
Template Conservation																			.	.	.	.
Template Sequence		S	W	V	T	R	K	L	K	G	H	V	S	L	P	L	V	T	.	.	.	.	T	N	R	I	N	D	P	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A	R	P	F
Template Known Secondary structure									T	T	S		S	S					.	.	.	.		S	S			S										T	T	S		S					S	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.					.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions