Job Description P77272 Confidence 25.78% Date Thu Jan 5 12:27:05 GMT 2012 Rank 15 Aligned Residues 43 % Identity 28% Template d2gola1 SCOP info Retroviral matrix proteins Retroviral matrix proteins Immunodeficiency virus matrix proteins Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																	.	.	.	.	.
Query SS confidence													.	.	.	.	.																	.	.	.	.	.
Query Sequence		S	E	L	L	N	T	I	L	T	R	V	.	.	.	.	.	G	G	P	G	N	I	A	S	C	G	N	C	M	T	R	L	.	.	.	.	.	R	L	G	V	H	D	S	S	L	V	D	P	N	I	K	T
Query Conservation													.	.	.	.	.																	.	.	.	.	.
Alig confidence													.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		S	E	G	C	R	Q	I	L	G	Q	L	Q	P	S	L	Q	T	G	S	E	E	L	R	S	L	Y	N	T	I	A	V	L	Y	C	V	H	Q	R	I	D	V	K	D	T	K	E	A	L	D	K	I	E	E
Template Known Secondary structure																	T	T	T			T	T															T	T				S	B
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions