Job Description P0AD57 Confidence 100.00% Date Wed Jan 25 15:20:25 GMT 2012 Rank 1 Aligned Residues 321 % Identity 45% Template c3oyrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trans-isoprenyl diphosphate synthase; PDBTitle: crystal structure of polyprenyl synthase from caulobacter crescentus2 cb15 complexed with calcium and isoprenyl diphosphate Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	E	K	I	N	E	L	T	A	Q	D	M	A	G	V	N	A	A	I	L	E	Q	L	N	S	D	V	Q	L	I	N	Q	L	G	Y	Y	I	V	S	G	G	G	K	R	I	R	P	M	I	A	V	L	A	A	R	A	V	G	Y	E	G	N	A	H	V	T	I	A	A	L	I	E	F	I	H	T	A	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	D	R	L	V	R	L	A	E	A	D	M	A	G	V	N	R	L	I	T	D	R	M	Q	S	D	V	A	I	I	P	A	L	A	E	H	L	I	A	A	G	G	K	R	L	R	P	L	M	T	V	A	A	A	R	L	A	G	A	D	N	D	H	F	Q	K	L	A	A	A	V	E	F	I	H	T	A	T	L
Template Known Secondary structure			S																						T			S	S	T											T	T																	T	T		S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	D	D	V	V	D	E	S	D	M	R	R	G	K	A	T	A	N	A	A	F	G	N	A	A	S	V	L	V	G	D	F	I	Y	T	R	A	F	Q	M	M	T	S	L	G	S	L	K	V	L	E	V	M	S	E	A	V	N	V	I	A	E	G	E	V	L	Q	L	M	N	V	N	D	P	D	I	T	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	D	D	V	V	D	G	S	Q	L	R	R	G	K	V	A	A	H	L	I	W	G	G	A	Q	S	V	L	V	G	D	F	L	F	A	R	A	F	E	L	M	V	E	T	N	S	M	K	A	L	E	I	L	A	R	A	S	R	V	I	A	E	G	E	V	L	Q	L	M	R	S	H	D	L	N	L	S	Q	A
Template Known Secondary structure									T					T	T				G	G	G	T	S																								T																										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	M	R	V	I	Y	S	K	T	A	R	L	F	E	A	A	A	Q	C	S	G	I	L	A	G	C	T	P	E	E	E	K	G	L	Q	D	Y	G	R	Y	L	G	T	A	F	Q	L	I	D	D	L	L	D	Y	N	A	D	G	E	Q	L	G	K	N	V	G	D	D	L	N	E	G	K	P	T	L	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	L	E	I	I	Q	A	K	T	A	E	L	F	A	A	A	S	E	A	G	A	V	S	A	G	V	D	V	A	K	S	E	A	L	R	D	Y	G	L	N	L	G	L	A	F	Q	L	A	D	D	A	L	D	Y	G	G	A	T	E	T	L	G	K	N	A	G	D	D	F	R	E	G	K	A	T	L	P	L	L
Template Known Secondary structure											T															T	T																															S						S	S		T	T						T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		242	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		H	A	M	H	H	G	T	P	E	Q	A	Q	.	M	I	R	T	A	I	E	Q	G	N	G	R	H	L	L	E	P	V	L	E	A	M	N	A	C	G	S	L	E	W	T	R	Q	R	A	E	E	E	A	D	K	A	I	A	A	L	Q	V	L	P	D	T	P	W	R	E	A	L	I	G	L	A	H	I	A	V	Q
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		L	A	I	A	R	S	G	P	R	E	A	E	F	W	E	R	A	I	G	R	R	E	Q	T	E	A	D	F	R	R	A	R	E	L	I	I	G	S	G	A	L	D	A	T	L	D	L	A	A	D	Y	A	D	K	A	K	A	A	L	A	M	F	P	A	N	D	W	R	E	A	L	E	E	L	A	D	F	A	V	S
Template Known Secondary structure							S		G	G	G								T	T	S																		T	T																				T	T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		321	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		333	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions