Job Description P0AD57 Confidence 100.00% Date Wed Jan 25 15:20:25 GMT 2012 Rank 31 Aligned Residues 263 % Identity 33% Template c3lsnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of putative geranyltranstransferase from pseudomonas2 fluorescens pf-5 complexed with magnesium Resolution 1.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		I	N	E	L	T	A	Q	D	M	A	G	V	N	A	A	I	L	E	Q	L	N	S	D	V	Q	L	.	.	.	I	N	Q	L	G	Y	Y	I	V	S	G	G	G	K	R	I	R	P	M	I	A	V	L	A	A	R	A	V	G	Y	E	G	N	A	H	V	T	I	A	A	L	I	E	F	I	H	T	A	T	L	L
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		L	T	A	Y	Q	A	S	S	Q	A	R	V	D	A	A	X	H	T	L	F	T	A	P	S	P	E	L	A	R	L	Y	E	A	X	R	Y	S	V	X	N	G	G	K	R	V	R	P	L	L	A	Y	A	A	C	E	A	L	G	G	K	P	E	Q	A	N	G	A	A	C	A	V	E	L	I	H	A	Y	S	L	V
Template Known Secondary structure																			G	G	G			S	S	G	G	G												T	T	T																T	T			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure						.	.																																											.	.	.	.	.	.	.	.												.	.
Query SS confidence						.	.																																											.	.	.	.	.	.	.	.												.	.
Query Sequence		H	D	D	V	.	.	V	D	E	S	D	M	R	R	G	K	A	T	A	N	A	A	F	G	N	A	A	S	V	L	V	G	D	F	I	Y	T	R	A	F	Q	M	M	T	S	L	G	S	.	.	.	.	.	.	.	.	L	K	V	L	E	V	M	S	E	A	V	.	.	N	V	I	A	E	G	E	V	L	Q	L
Query Conservation						.	.																																											.	.	.	.	.	.	.	.												.	.
Alig confidence						.	.																																											.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		H	D	D	L	P	A	X	D	D	D	D	L	R	R	G	Q	P	T	T	H	K	A	F	D	E	A	C	A	I	L	A	G	D	G	L	Q	S	L	A	F	S	A	L	L	D	P	A	L	S	D	A	S	A	E	I	R	L	R	X	V	T	T	L	A	Q	A	A	G	P	A	G	X	V	G	G	Q	A	I	D	L
Template Known Secondary structure				T	S	T	T	T	T			S			T	T								S																							T	T	S																				S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		M	N	V	N	D	P	D	I	T	E	E	N	Y	M	R	V	I	Y	S	K	T	A	R	L	F	E	A	A	A	Q	C	S	G	I	L	A	G	.	C	T	P	E	E	E	K	G	L	Q	D	Y	G	R	Y	L	G	T	A	F	Q	L	I	D	D	L	L	D	Y	N	A	D	G	E	Q	L	G	K	N	V	G	D
Query Conservation																																							.
Alig confidence							.																																.																																		.	.	.	.	.	.	.	.	.
Template Conservation							.																																																																		.	.	.	.	.	.	.	.	.
Template Sequence		G	S	V	G	L	.	K	L	D	Q	Q	A	L	E	Y	X	H	R	H	K	T	G	A	L	I	E	A	S	V	I	L	G	A	L	A	S	G	R	A	E	K	G	E	L	K	A	L	Q	T	Y	A	Q	A	I	G	L	A	F	Q	V	Q	D	D	I	L	D	V	E	S	D	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T		.															T															T	T																																			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.																																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	N	E	G	K	P	T	L	P	L	L	H	A	M	H	H	G	T	P	E	Q	A	Q	M	I	R	T	A	I	E	Q	G	N	G	R	H	L	L	E	P	V	L	E	A	M	N	A	C	G	S	L	E	W	T	R	Q	R	A	E	E	E	A	D	K	A	I	A	A	L	Q	V	L	P	D	T	P	W	R	E
Query Conservation
Alig confidence		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		.	.	.	A	T	L	P	T	Y	P	A	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	A	A	A	K	E	Y	A	L	E	L	R	D	Q	A	L	H	A	L	R	P	F	D	.	.	A	A	A	E
Template Known Secondary structure		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T	T	S		.	.	G	G	G
Template Predicted Secondary structure		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
					233	.	.	.	.	.	.	240	.	.																																						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270
		310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	G	L	A	H	I	A	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	R	E	L	A	R	Y	I	V	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions