Job Description P0AD57 Confidence 100.00% Date Wed Jan 25 15:20:25 GMT 2012 Rank 35 Aligned Residues 257 % Identity 26% Template c3lomA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of geranyltransferase from legionella2 pneumophila Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	N	E	L	T	A	Q	D	M	A	G	V	N	A	A	I	L	E	Q	L	N	S	D	V	Q	L	I	N	Q	L	G	Y	Y	I	V	S	G	G	G	K	R	I	R	P	M	I	A	V	L	A	A	R	A	V	G	Y	E	G	N	A	H	V	T	I	A	A	L	I	E	F	I	H	T	A	T	L	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	V	I	D	K	Y	T	Q	R	H	E	L	Y	L	E	Q	L	L	N	E	I	I	I	P	A	P	Q	I	R	S	A	L	H	Y	A	L	F	S	G	G	K	R	I	R	P	I	L	V	Y	L	A	G	D	L	I	D	V	D	Q	G	V	L	D	I	I	A	A	A	L	E	L	T	H	C	Y	S	L	I	H
Template Known Secondary structure																					T	T	S																		S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		84	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure					.	.																																												.	.	.	.	.	.	.	.										.	.
Query SS confidence					.	.																																												.	.	.	.	.	.	.	.										.	.
Query Sequence		D	D	V	.	.	V	D	E	S	D	M	R	R	G	K	A	T	A	N	A	A	F	G	N	A	A	S	V	L	V	G	D	F	I	Y	T	R	A	F	Q	M	M	T	S	L	G	S	L	.	.	.	.	.	.	.	.	K	V	L	E	V	M	S	E	A	.	.	V	N	V	I	A	E	G	E	V	L	Q	L	M
Query Conservation					.	.																																												.	.	.	.	.	.	.	.										.	.
Alig confidence					.	.																																												.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		D	D	L	P	A	M	D	N	D	D	L	R	R	G	K	P	S	C	H	K	A	F	D	E	A	T	A	I	L	V	G	D	G	M	Q	A	L	A	I	E	V	L	L	M	R	L	S	P	L	L	P	A	A	Q	V	V	A	I	T	Q	V	L	V	N	A	S	G	I	S	G	M	V	S	G	Q	S	L	D	L	S
Template Known Secondary structure				S	T	T	T	T			S			T	T								S																									T	T	T	S																	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		N	V	N	D	P	D	I	T	E	E	N	Y	M	R	V	I	Y	S	K	T	A	R	L	F	E	A	A	A	Q	.	C	S	G	I	L	A	G	C	T	P	E	E	E	K	G	L	Q	D	Y	G	R	Y	L	G	T	A	F	Q	L	I	D	D	L	L	D	Y	N	A	D	G	E	Q	L	G	K	N	V	G	D	D
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		E	L	A	K	S	S	V	T	E	E	Q	L	R	E	I	H	L	L	K	T	G	K	L	I	L	A	C	F	E	M	V	L	A	A	Q	H	E	V	S	E	Q	I	K	S	A	L	R	T	Y	G	K	H	I	G	L	V	F	Q	M	Q	D	D	Y	L	D	L	Y	A	P	K	T	T	F	A	T	L	F	N	K	Q
Template Known Secondary structure		T	T	T	S	S															T													T	T		S	S																																								S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		L	N	E	G	K	P	T	L	P	L	L	H	A	M	H	H	G	T	.	.	P	E	Q	A	Q	M	I	R	T	A	I	E
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		Q	L	E	E	E	I	A	V	H	Y	Q	I	A	M	D	S	L	R	L	F	G	S	K	A	A	A	L	I	E	L	T	K
Template Known Secondary structure																	T	T	T	T	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions