Job Description P0AD57 Confidence 97.14% Date Wed Jan 25 15:20:25 GMT 2012 Rank 46 Aligned Residues 147 % Identity 17% Template c2zcpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dehydrosqualene synthase; PDBTitle: crystal structure of the c(30) carotenoid dehydrosqualene2 synthase from staphylococcus aureus complexed with3 farnesyl thiopyrophosphate Resolution 2.25 Å

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	V	N	V	I	A	E	G	E	V	L	Q	L	M	N	V	N	D	P	D	I	T	E	E	N	Y	M	R	V	I	Y	S	K	T	A	R	L	F	E	A	A	A	Q	C	S	G	I	L	A	G	C	T	P	E	E	E	K	G	L	Q	D	Y	G	R	Y	L	G	T	A	F	Q	L	I	D	D	L	L	D	Y
Query Conservation
Alig confidence																			.	.																										.	.	.								.	.	.
Template Conservation																			.	.																										.	.	.								.	.	.
Template Sequence		Q	S	F	Y	N	L	I	D	T	V	Y	K	D	Q	H	F	T	.	.	M	F	E	T	D	A	E	L	F	G	Y	C	Y	G	V	A	G	T	V	G	E	V	L	T	P	.	.	.	I	L	S	D	H	E	T	.	.	.	H	Q	T	Y	D	V	A	R	R	L	G	E	S	L	Q	L	I	N	I	L	R	D	V
Template Known Secondary structure													G	G	G	S			.	.			S	S												T										.	.	.				S			S	.	.	.
Template Predicted Secondary structure																			.	.																										.	.	.								.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	D	G	E	Q	L	G	K	N	V	G	D	D	L	N	E	G	K	P	T	L	P	L	L	H	A	M	H	H	G	T	P	E	Q	A	Q	M	I	R	T	A	I	E	Q	G	N	G	R	H	L	L	E	P	V	L	E	A	M	N	A	C	G	S	L	E	W	T	R	Q	R	A	E	E	E	A	D	K	A	I
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	.	E	D	F	E	N	E	R	I	Y	F	S	K	Q	R	L	K	Q	Y	E	V	D	I	A	.	.	.	.	.	E	V	Y	Q	N	G	V	N	N	H	Y	I	D	.	.	.	.	.	.	.	.	.	.	L	W	E	Y	Y	A	A	I	A	E	K	D	F	R	D	V	M
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.					T	T				S								T	T					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174												.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	Q	V	L	P	D	T	P	W	R	E	A	L	I	G	L	A	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	K	V	F	S	I	E	A	Q	P	I	I	E	L	A	A	R	I	Y
Template Known Secondary structure			S	G	G	G	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions