Job Description P0AD57 Confidence 100.00% Date Wed Jan 25 15:20:25 GMT 2012 Rank 23 Aligned Residues 296 % Identity 20% Template c2o1oB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative farnesyl pyrophosphate synthase; PDBTitle: cryptosporidium parvum putative polyprenyl pyrophosphate2 synthase (cgd4_2550) in complex with risedronate. Resolution 2.42 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																.	.	.	.
Query SS confidence																		.	.																																.	.	.	.
Query Sequence		A	G	V	N	A	A	I	L	E	Q	L	N	S	D	V	Q	.	.	L	I	N	Q	L	G	Y	Y	I	V	S	G	G	G	K	R	I	R	P	M	I	A	V	L	A	A	R	A	V	G	Y	.	.	.	.	E	G	N	A	H	V	T	I	A	A	L	I	E	F	I	H	T	A	T	L	L	H	D	D	V	V	D
Query Conservation																		.	.																																.	.	.	.
Alig confidence																		.	.											.																					.	.	.	.
Template Conservation																														.
Template Sequence		D	K	F	K	V	I	V	Y	N	V	L	K	K	L	P	V	I	E	Y	Y	L	N	C	I	D	Y	N	V	.	K	K	G	K	H	I	R	G	K	I	L	V	L	I	S	S	L	S	S	A	Y	S	N	I	K	R	D	S	I	Y	L	L	G	W	V	V	E	A	I	Q	A	L	I	L	I	A	D	D	I	M	D
Template Known Secondary structure												T																	T	.	S	S	S															S	S		S		S	T																											T
Template Predicted Secondary structure																														.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.																								.	.
Query SS confidence																																											.	.	.	.	.	.	.																								.	.
Query Sequence		E	S	D	M	R	R	G	K	A	T	A	N	A	A	F	G	N	A	A	S	V	L	V	G	D	F	I	Y	T	R	A	F	Q	M	M	T	S	L	G	S	L	.	.	.	.	.	.	.	K	V	L	E	V	M	S	E	A	V	N	V	I	A	E	G	E	V	L	Q	L	M	N	.	.	V	N	D	P	D	I	T
Query Conservation																																											.	.	.	.	.	.	.																								.	.
Alig confidence																																											.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		S	G	K	F	R	R	G	A	P	C	W	Y	I	V	H	G	Q	S	N	A	I	N	D	I	F	F	L	K	M	L	S	L	S	L	I	F	E	L	S	S	V	F	G	N	D	I	V	M	K	I	Q	K	I	Y	N	E	S	I	F	F	T	V	L	G	Q	H	L	D	L	S	Y	F	D	L	S	K	A	D	K	I
Template Known Secondary structure		T					T	T																														T	T																																S				S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																	.														.	.
Query SS confidence																	.														.	.
Query Sequence		E	E	N	Y	M	R	V	I	Y	S	K	T	A	R	L	.	F	E	A	A	A	Q	C	S	G	I	L	A	G	.	.	C	T	P	E	E	E	K	G	L	Q	D	Y	G	R	Y	L	G	T	A	F	Q	L	I	D	D	L	L	D	Y	N	A	D	G	E	Q	L	G	K	N	V	G	D	D	L	N	E	G	K	P
Query Conservation																	.														.	.
Alig confidence																	.														.	.																																.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		S	E	R	Y	F	S	M	V	E	M	K	T	S	R	Y	T	F	Y	M	P	V	F	F	G	L	T	L	S	E	I	Q	V	S	S	A	Q	L	N	L	I	E	A	I	L	Y	K	L	G	E	F	Y	Q	V	H	N	D	V	S	D	Y	L	F	.	.	.	.	.	N	D	S	N	A	D	D	I	C	R	F	K	L
Template Known Secondary structure													T					T												T					S	S	T	T																										.	.	.	.	.			S	T	T	S	T	T	T	T	T
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	P	L	L	H	A	M	H	H	G	T	P	E	Q	A	Q	M	I	R	T	A	I	E	Q	G	N	G	R	H	L	L	E	P	V	L	E	A	M	N	A	C	G	S	L	E	W	T	R	Q	R	A	E	E	E	A	D	K	A	I	A	A	L	Q	V	L	P	D	T	P	W	R	E	A	L	I	G	L	A	H
Query Conservation
Alig confidence																													.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		T	W	P	L	Q	K	S	F	E	I	A	D	E	E	M	K	L	K	I	S	E	N	Y	G	K	N	S	.	.	.	.	.	S	L	V	K	D	C	Y	N	L	L	K	I	N	E	H	Y	L	E	Y	Q	R	N	A	L	D	Y	L	I	K	L	V	K	D	I	T	D	D	S	L	Q	K	V	F	I	H	L	I	H
Template Known Secondary structure														T	T									T	T	T			.	.	.	.	.										T	T																					T	T		S	S	S	S
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		317	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	S	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions