 |
Job Description | P0AD57 | Confidence | 100.00% | Date | Wed Jan 25 15:20:25 GMT 2012 |
Rank | 39 | Aligned Residues | 230 |
% Identity | 22% | Template | c2ftzA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:geranyltranstransferase; |
PDBTitle: crystal structure of geranyltranstransferase (ec 2.5.1.10) (tm0161)2 from thermotoga maritima at 1.90 a resolution
|
Resolution | 1.90 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
A | Q | D | M | A | G | V | N | A | A | I | L | E | Q | L | N | S | D | V | Q | L | I | N | Q | L | G | Y | Y | I | V | S | G | G | G | K | R | I | R | P | M | I | A | V | L | A | A | R | A | V | G | Y | E | G | N | A | H | V | T | I | A | A | L | I | E | F | I | H | T | A | T | L | L | H | D | D | V | V | D | . |
E |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
| . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   | . |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|   |
|
Template Sequence |   |
H | H | H | M | K | E | V | E | E | R | I | R | E | I | L | R | P | G | W | D | L | L | T | E | E | A | M | L | Y | S | A | T | V | G | G | R | I | R | P | L | L | V | L | T | L | G | E | D | L | G | V | E | E | . |
E | L | L | D | V | A | V | A | V | E | L | F | H | T | A | S | L | I | H | D | D | L | P | P | I | D |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|