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Job DescriptionP0AD57
Confidence100.00%DateWed Jan 25 15:20:25 GMT 2012
Rank34Aligned Residues268
% Identity23%Templatec2azjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:geranylgeranyl pyrophosphate synthetase; PDBTitle: crystal structure for the mutant d81c of sulfolobus2 solfataricus hexaprenyl pyrophosphate synthase
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  ELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVV
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Template Sequence  EFWLEAKATIDRLIEQFLNSNRDWDLVDISSYILKDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLALCDIV
Template Known Secondary structure  TTTTGGGGGGTTS



TTT

SGGG

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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  DESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVI
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Template Sequence  DLDATRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELWKDTSVGALRDM. . . . . . . YDNSDYIRTI
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S
S
S
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   85....90.........100.........110.........120.........130.........140....... ..150.......
 
   168.170.........180.........190.........200.........210....... ..220.........230.........240...
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Query Sequence  YSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYN. . . . ADGEQLGKNVGDDLNEGKPTLPLLHA
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Template Sequence  ELKTGSLFKLSTVLSAYASKHYNTK. QQMLDVGKYLGIIYQVIDDFVDYKTKKVEEIDGSAKQLFKYYREGKLEEYVRSV
Template Known Secondary structure  TTT
GGG.TTTSS
SS


STTTS
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   158.160.........170.........180.. .......190.........200.........210.........220.........230......
 
   244.....250.........260.........270.........280....
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Query Sequence  MHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMNACGSLEWT
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Template Sequence  YLEYKQKYDELISNIPFQSKYLSEIRSLPEFL. ANGLLKEA
Template Known Secondary structure  S


STTSSGGGG.
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   237..240.........250.........260........ .270......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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