Job Description P0AD57 Confidence 55.30% Date Wed Jan 25 15:20:25 GMT 2012 Rank 52 Aligned Residues 194 % Identity 11% Template c1hm4A_ PDB info PDB header:lyase Chain: A: PDB Molecule:pentalenene synthase; PDBTitle: n219l pentalenene synthase Resolution 3.47 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.									110	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.
Query Sequence		K	R	I	R	P	M	I	A	V	L	A	A	R	A	V	G	Y	E	G	N	A	H	V	T	I	A	A	L	I	E	F	I	H	T	A	T	L	L	H	D	D	V	V	D	E	S	D	M	R	R	G	K	A	T	A	N	A	A	F	G	N	A	A	S	V	.	.	.	.	.	.	.	.	L	V	G	D	F	I	Y
Query Conservation																																																																			.	.	.	.	.	.	.	.
Alig confidence																												.	.	.																																					.	.	.	.	.	.	.	.
Template Conservation																												.	.	.
Template Sequence		R	H	L	R	G	G	Y	A	D	L	A	S	R	F	Y	P	H	A	T	G	A	D	L	D	L	G	.	.	.	V	D	L	M	S	W	F	F	L	F	D	D	L	F	D	G	P	R	G	E	N	P	E	D	T	K	Q	L	T	D	Q	V	A	A	A	L	D	G	P	L	P	D	T	A	P	P	I	A	H	G	F
Template Known Secondary structure						T											T	T			T							.	.	.													T	T	S	S	G	G	G	G														G	G	G	T	S				T	T	S
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		T	R	A	F	Q	M	M	T	S	L	G	S	L	K	V	L	E	V	M	S	E	A	V	N	V	I	A	E	G	E	V	L	Q	L	M	N	V	N	D	P	D	I	T	E	E	N	Y	M	R	V	I	Y	S	K	T	A	R	L	F	E	A	A	A	Q	C	S	G	I	L	A	G	C	T	P	E	E	E	K	.	.
Query Conservation																																																																																.	.
Alig confidence																																			.	.	.	.	.	.																																								.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		A	D	I	W	R	R	T	C	E	G	M	T	P	A	W	C	A	R	S	A	R	H	W	R	N	Y	F	D	G	Y	V	D	E	.	.	.	.	.	.	A	E	S	R	A	A	Q	Y	L	A	M	R	R	H	T	I	G	V	Q	P	T	V	D	L	A	E	R	A	G	R	F	E	V	P	H	R	V	F	D	S	A
Template Known Secondary structure										T	T	S																							.	.	.	.	.	.	S											T	T	T	T	T														T									T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		G	L	Q	D	Y	G	R	Y	L	G	T	A	F	Q	L	I	D	D	L	L	D	Y	N	A	D	G	E	Q	L	G	K	N	V	G	D	D	L	N	E	G	K	P	.	T	L	P	L	L	H	A	M	H	H	G	T	P	E	Q	A	Q	M	I	R	T	A
Query Conservation																																												.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	M	S	A	M	L	Q	I	A	V	D	V	N	L	L	L	L	D	I	A	S	L	E	.	.	.	.	.	.	.	.	.	.	.	K	E	E	A	R	G	E	Q	N	N	M	V	M	S	R	S	V	S	H	M	Q	N	E	V	R	A	R	L	E	Q	Y
Template Known Secondary structure																						S			.	.	.	.	.	.	.	.	.	.	.					S	S				S	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.												.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions