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Job DescriptionP22259
Confidence100.00%DateThu Jan 5 11:38:50 GMT 2012
Rank10Aligned Residues505
% Identity16%Templatec2qeyA_
PDB info PDB header:lyaseChain: A: PDB Molecule:phosphoenolpyruvate carboxykinase, cytosolic [gtp]; PDBTitle: rat cytosolic pepck in complex with gtp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50. .. ......60.........70.........80.........90
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Query Sequence  EAYGISDVHDIVYNPSYDLLYQEELDPSLTGYERGVLTN. LG. AVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKG
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Template Sequence  GNAQLCQPEYIHICDGSEEEYGRLLAHMQEEGVIRKLKKYDNCWLALTDPRDVARIESKTVII. TQEQRDTVPIPKSGQS
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   33......40.........50.........60.........70.........80.........90..... ....100.........110.
 
   91........100.........110.........120.........130.........140.........150.........160... .....
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Query Sequence  KNDNKPLSPETWQHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGF. . KPDFI
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Template Sequence  QLGRWMSEEDFEKAFNARFPGCMKGRTMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGTSVLEALGDGEFIK
Template Known Secondary structure  SS


TTSTTTTTTSS
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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   169170.........180. ....... .190.........200.........210. .... ....220.........230.....
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Query Sequence  VMNGAKCTNPQWK. . . . EQGLNSE. NFVAFNLTERMQLIGGTWYGGEM. . . KKGM. FSMMNYLLPLKGIASMHCSA. . . .
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Template Sequence  CLHSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAEHMLILGIT
Template Known Secondary structure 
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SS
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   192.......200.........210.........220.........230.........240.........250.........260.........270.
 
   236...240.........250.........260... ......270... ..... .280.........290.........300...
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Query Sequence  . NVGEKGDVAVFFGLSGTGKTTLSTDPKR. . . . . . RLIGDDEHGW. . DDDGV. . . FNFEGGCYAKTIKLSKEAEPEIYNA
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Template Sequence  NPEGKKKYLAAAFP. SACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKT
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   272.......280..... ....290.........300.........310.........320.........330.........340.........350
 
   304.....310.........320........ .330.........340.........350. .....
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Query Sequence  IRRDALLENVTVREDGTIDFDDGSK. . . . . . . . . . . . . . . . . . . . . . . . . TENTRVSYPIYHIDNIVKPVSKA. . GHATK
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Template Sequence  IQKNTIFTNVAETSDGGVYWEGIDEPLAPGVTITSWKNKEWRPQDEEPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEG
Template Known Secondary structure  TTBS
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TT


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   351........360.........370.........380.........390.........400.........410.........420.........430
 
   357..360.........370.........380.........390.........400.........410.........420.........430.....
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Query Sequence  VIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQ.
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Template Sequence  IIFGGRRP. AGVPLVYEALSWQHGVFVGAAMRSE. . . . . . . . . . . VIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKL
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   431....... .440.........450.........460... ......470.........480.........490........
 
   436...440...... ...450... ......460.........470.........480.........490.........500. ........
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Query Sequence  AYLVNTGWNGT. . . GKRISIK. . DTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYA. SPEQWQEK
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Template Sequence  PKIFHVNWFRKDKNGKFLWPGFGENSRVLEWMFGRIEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEELFGISKEFWEKE
Template Known Secondary structure 

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GGGGTT
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   509510.........520.........530.........540.........550.........560.........570.........580........
 
   510.........520.........530.....
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Query Sequence  AETLAKLFIDNFDKYTDTPAGAALVA
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Template Sequence  VE. . . . EIDKYLEDQVNADLPYEIER
Template Known Secondary structure  ....TGGG

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   589590 .........600.........610
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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