Return to main results Retrieve Phyre Job Id

Job DescriptionP22259
Confidence61.27%DateThu Jan 5 11:38:50 GMT 2012
Rank449Aligned Residues96
% Identity14%Templatec2j6iC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   426...430.........440.........450.........460.........470.........480.........490... ......500
Predicted Secondary structure 


































.....


Query SS confidence 



































































. . . . .






Query Sequence  VKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKI. . . . . LDPRNTY
Query Conservation     
       

 


  
 
  
    
  

 

  
 
   
      

  

    

    .....
 
    
Alig confidence 
















..

....










































.....






Template Conservation     
  

  
 


 
..

.... 



 

  

  
 
 





   

   
 

    

     






 
Template Sequence  KELLSKFKKGAWLVNTA. . RG. . . . AICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSG
Template Known Secondary structure  TTS
TT
S..
G....GGB
TSS

SSSS

TT



TTS



S
GG
Template Predicted Secondary structure 






..

....

































Template SS confidence 















































































   241........250....... .. 260.........270.........280.........290.........300.........310....
 
   501........510.........520.........530.
Predicted Secondary structure 








Query SS confidence 






























Query Sequence  ASPEQWQEKAETLAKLFIDNFDKYTDTPAGA
Query Conservation   
   
      
   
   
 

       
Alig confidence 










....















Template Conservation   
 
       ....    

     
    
Template Sequence  TTLDAQTRYAQ. . . . GTVNILESFFTGKFDY
Template Known Secondary structure  GS....TS



Template Predicted Secondary structure 

....





Template SS confidence 






























   315....320..... ....330.........340.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions