Job Description P22259 Confidence 100.00% Date Thu Jan 5 11:38:50 GMT 2012 Rank 7 Aligned Residues 507 % Identity 17% Template c2fahB_ PDB info PDB header:lyase Chain: B: PDB Molecule:phosphoenolpyruvate carboxykinase; PDBTitle: the structure of mitochondrial pepck, complex with mn and gdp Resolution 2.09 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.							.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																							.					.																							.	.	.	.	.	.
Query SS confidence																																							.					.																							.	.	.	.	.	.
Query Sequence		E	A	Y	G	I	S	D	V	H	D	I	V	Y	N	P	S	Y	D	L	L	Y	Q	E	E	L	D	P	S	L	T	G	Y	E	R	G	V	L	.	T	N	L	G	.	A	V	A	V	D	T	G	I	F	T	G	R	S	P	K	D	K	Y	I	V	R	D	.	.	.	.	.	.	D	T	T	R	D	T	F	W	W
Query Conservation																																							.					.																							.	.	.	.	.	.
Alig confidence																																							.					.																							.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	V	R	L	C	R	P	R	E	V	L	L	C	D	G	S	E	E	E	G	K	E	L	L	R	G	L	Q	D	D	G	V	L	H	P	L	P	K	Y	D	N	C	W	L	A	R	T	D	P	R	D	V	A	R	V	E	S	K	T	V	L	V	T	P	E	Q	S	D	A	V	P	P	P	P	P	S	G	G	P
Template Known Secondary structure										S																							T	S					T	T	S	B	S								T	T	S	S	S			G	G	G						S	S					S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		A	D	K	G	K	G	K	N	D	N	K	P	L	S	P	E	T	W	Q	H	L	K	G	L	V	T	R	Q	L	S	G	K	R	L	F	V	V	D	A	F	C	G	A	N	P	D	T	R	L	S	V	R	F	I	T	E	V	A	W	Q	A	H	F	V	K	N	M	F	I	R	P	S	D	E	E	L	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence				.	.	.	.	.																																																																						.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		P	Q	.	.	.	.	.	L	G	N	W	M	S	P	N	A	F	Q	A	A	V	Q	E	R	F	P	G	C	M	A	G	R	P	L	Y	V	I	P	F	S	M	G	P	P	T	S	P	L	A	K	L	G	V	Q	V	T	D	S	P	Y	V	V	L	S	M	R	I	M	T	R	V	G	P	A	V	L	Q	R	L	D
Template Known Secondary structure			S	.	.	.	.	.	S																		T	T	T	T	T	T	S										S		T	T		T	T									S												S			S	G	G	G	G	G	G
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		131	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																	.															.																							.	.	.					.
Query SS confidence																	.															.																							.	.	.					.
Query Sequence		A	G	F	K	P	D	F	I	V	M	N	G	A	K	C	.	T	N	P	Q	W	K	E	Q	G	L	N	S	E	N	.	F	V	A	F	N	L	T	E	R	M	Q	L	I	G	G	T	W	Y	G	G	E	M	.	.	.	K	K	G	M	.	F	S	M	M	N	Y	L	L	P	L	K	G	I	A	S	M	H	C	S
Query Conservation																	.															.																							.	.	.					.
Alig confidence																	.															.																							.	.	.					.
Template Conservation
Template Sequence		D	D	F	V	R	C	L	H	S	V	G	R	P	L	P	L	T	E	P	L	V	S	S	W	P	C	D	P	S	R	V	L	V	A	H	I	P	S	E	R	R	I	V	S	F	G	S	G	Y	G	G	N	S	L	L	G	K	K	C	F	A	L	R	I	A	S	R	M	A	Q	Q	Q	G	W	L	A	E	H	M	L
Template Known Secondary structure		T	T	S								S			S	S		S	S			B	T	T	B				G	G	G							G	G	G	T						S			S						T	T	T					T											T					S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		235	.			.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.							.	.	.	.	.	.	270	.			.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.													.	.																.	.	.	.	.	.									.	.								.	.	.
Query SS confidence				.	.													.	.																.	.	.	.	.	.									.	.								.	.	.
Query Sequence		A	N	.	.	V	G	E	K	G	D	V	A	V	F	F	G	.	.	L	S	G	T	G	K	T	T	L	S	T	D	P	K	R	.	.	.	.	.	.	R	L	I	G	D	D	E	H	.	.	G	W	D	D	D	G	V	.	.	.	F	N	F	E	G	G	C	Y	A	K	T	I	K	L	S	K	E	A	E	P	E
Query Conservation				.	.													.	.																.	.	.	.	.	.									.	.								.	.	.
Alig confidence				.	.													.	.																.	.	.	.	.	.									.	.								.	.	.
Template Conservation
Template Sequence		I	L	G	V	T	S	P	S	G	E	K	R	Y	M	A	A	A	F	P	S	A	C	G	K	T	N	L	A	M	M	T	P	S	L	P	G	W	R	I	H	C	V	G	D	D	I	A	W	M	K	F	D	D	E	G	R	L	R	A	I	N	P	E	R	G	F	F	G	V	A	P	G	T	S	S	R	T	N	P	N
Template Known Secondary structure								T	T	S											T	T	S	S						T				S	S	T	T								S	S								T	T	S	B								S							T	T		S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.																										.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		I	Y	N	A	I	R	R	D	A	L	L	E	N	V	T	V	R	E	D	G	T	I	D	F	D	D	G	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	N	T	R	V	S	Y	P	I	Y	H	I	D	N	I	V	K	P	V	S	K	A	.	G	H
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		A	M	A	T	I	A	R	N	T	I	F	T	N	V	G	L	R	S	D	G	G	V	Y	W	D	G	L	D	E	P	T	E	P	G	V	T	Y	T	S	W	L	G	K	P	W	K	H	G	D	P	E	P	C	A	H	P	N	S	R	F	C	A	P	A	D	Q	C	P	I	M	D	P	R	W	D	D	P	E	G	V
Template Known Secondary structure						T	T	B	S					S					S	S	S					T	T							T	T						T	T	S	S				T	T		S	S		S	S		T	T							G	G	G		T	T	B		T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	K	V	I	F	L	T	A	D	A	F	G	V	L	P	P	V	S	R	L	T	A	D	Q	T	Q	Y	H	F	L	S	G	F	T	A	K	L	A	G	T	E	R	G	I	T	E	P	T	P	T	F	S	A	C	F	G	A	A	F	L	S	L	H	P	T	Q	Y	A	E	V	L	V	K	R	M	Q	A	A	G
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		P	I	D	A	I	I	F	G	G	R	R	P	R	G	V	P	L	V	V	E	A	F	G	W	R	H	G	V	F	M	G	S	A	M	R	S	E	A	T	A	A	A	E	H	.	K	G	G	R	L	M	H	D	P	F	A	M	R	P	F	F	G	Y	N	A	G	R	Y	L	E	H	W	L	S	T	G	L	R	S	N
Template Known Secondary structure													S	S	S	S		S					S	S										T							T	T	S	S		.		T	T						G	G	G		T	T	T		S	S													T	T		T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		434	.		.	.	.	.	440	.	.	.	.	.	.	.	.										.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.					.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.														.	.	.	.	.	.	.	.	.																																					.	.	.	.
Query SS confidence				.														.	.	.	.	.	.	.	.	.																																					.	.	.	.
Query Sequence		A	Q	.	A	Y	L	V	N	T	G	W	N	G	T	G	K	.	.	.	.	.	.	.	.	.	R	I	S	I	K	D	T	R	A	I	I	D	A	I	L	N	G	S	L	D	N	A	E	T	F	T	L	P	M	F	N	L	A	I	P	T	.	.	.	.	E	L	P	G	V	D	T	K	I	L	D	P	R	N	T
Query Conservation				.														.	.	.	.	.	.	.	.	.																																					.	.	.	.
Alig confidence				.														.	.	.	.	.	.	.	.	.															.						.	.	.						.				.				.	.	.	.
Template Conservation																																									.						.	.	.						.				.
Template Sequence		A	R	L	P	R	L	F	H	V	N	W	F	L	R	D	N	E	G	R	F	V	W	P	G	F	G	H	N	A	R	V	L	A	W	I	F	G	R	I	.	Q	G	R	D	T	.	.	.	A	R	P	T	P	.	I	G	W	.	V	P	K	E	G	D	L	D	L	G	G	L	P	G	V	D	Y	S	Q	L	F	P
Template Known Secondary structure			B									S			B		S	S	S	S	B	S	S			G	G	G	G												.	T	T		S		.	.	.					T	.	T			.				B	T	T	B			T	T		T	T							S
Template Predicted Secondary structure																																									.						.	.	.						.				.
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.				.	570	.	.	.		.	.	.		.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	S	P	E	Q	W	Q	E	K	A	E	T	L	A	K	L	F	I	D	N	F	D	K	Y	T	D	T	P	A	G	A	A	L	V	A	A
Query Conservation
Alig confidence		.																								.	.	.	.
Template Conservation		.																								.	.	.	.
Template Sequence		.	M	E	K	G	F	W	E	E	E	C	R	Q	L	R	E	Y	Y	G	E	N	F	G	A	.	.	.	.	D	L	P	R	D	V	M	A	E
Template Known Secondary structure		.																					T	G	G	.	.	.	.	G	S
Template Predicted Secondary structure		.																								.	.	.	.
Template SS confidence
			599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.					.	.	.	.	.	.	.	.	630