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Job DescriptionP22259
Confidence100.00%DateThu Jan 5 11:38:50 GMT 2012
Rank3Aligned Residues504
% Identity67%Templatec1yvyA_
PDB info PDB header:lyaseChain: A: PDB Molecule:phosphoenolpyruvate carboxykinase [atp]; PDBTitle: crystal strucutre of anaerobiospirillum succiniciproducens2 phosphoenolpyruvate carboxykinase
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  PQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGYERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKG
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Template Sequence  SESLAKYGITGATNIVHNPSHEELFAAETQASLEGFEKGTVTEMGAVNVMTGVYTGRSPKDKFIVKNEASK. EIWWTS. D
Template Known Secondary structure  T



S
S

T
TT

GGG


TTS


TT
SS

GGG
SGGGT.TS



.S
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   4.....10.........20.........30.........40.........50.........60.........70.... .....80 .
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  KGKNDNKPLSPETWQHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGFKPDFI
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Template Sequence  EFKNDNKPVTEEAWAQLKALAGKELSNKPLYVVDLFCGANENTRLKIRFVMEVAWQAHFVTNMFIRPTEEELKGFEPDFV
Template Known Secondary structure  SS

S

TSSS
SSSSTT
S
SB


SSTTTT


S
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   169170.........180.........190.........200.........210.........220.........230.........240. ......
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Query Sequence  VMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKG. DVAVFF
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Template Sequence  VLNASKAKVENFKELGLNSETAVVFNLAEKMQIILNTWYGGEMKKGMFSMMNFYLPLQGIAAMHCSANTDLEGKNTAIFF
Template Known Secondary structure  TT


GGGTTTT
SSS
TTTTS


TTGGGT


TTS
S
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   248.250.........260.........270.........280.........290.........300.........310.........320.......
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Query Sequence  GLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGS
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Template Sequence  GLSGTGKTTLSTDPKRLLIGDDEHGWDDDGVFNFEGGCYAKVINLSKENEPDIWGAIKRNALLENVTVDANGKVDFADKS
Template Known Secondary structure 

TTS


TTSSS
SS
S
S
TT

TTT

STT
S

B
TT

B
TT

S
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  KTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSA
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Template Sequence  VTENTRVSYPIFHIKNIVKPVSKAPAAKRVIFLSADAFGVLPPVSILSKEQTKYYFLSGFTAK. . . . . . . . . . PTPTFSS
Template Known Secondary structure  S
S

GGGSSSB

SSSS

S

TTS
S
S



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G
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   322.......330.........340.........350.........360.........370.........380.... .....390.
 
   408.410.........420.........430.........440.........450.........460.........470.........480.......
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Query Sequence  CFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELP
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Template Sequence  CFGAAFLTLPPTKYAEVLVKRMEASGAKAYLVNTGWNGTGKRISIKDTRGIIDAILDGSIDTANTATIPYFNFTVPTELK
Template Known Secondary structure  GG
GGG

S
TT

SB
SSSSB

SSGGGTS



BTTTTB


S

T
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   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   488.490.........500.........510.........520....
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Query Sequence  GVDTKILDPRNTYASPEQWQEKAETLAKLFIDNFDKY
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Template Conservation 
     
 
     
 
        
   
   
  
Template Sequence  GVDTKILDPRNTYADASEWEVKAKDLAERFQKNFKKF
Template Known Secondary structure  TS
TTTTSTGGGSSSGGG
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   482.......490.........500.........510........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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