Job Description P0AF12 Confidence 100.00% Date Thu Jan 5 11:24:52 GMT 2012 Rank 5 Aligned Residues 228 % Identity 61% Template c3dp9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:mta/sah nucleosidase; PDBTitle: crystal structure of vibrio cholerae 5'-methylthioadenosine/s-adenosyl2 homocysteine nucleosidase (mtan) complexed with butylthio-dadme-3 immucillin a Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	I	I	G	A	M	E	E	E	V	T	L	L	R	D	K	I	E	N	R	Q	T	I	S	L	G	G	C	E	I	Y	T	G	Q	L	N	G	T	E	V	A	L	L	K	S	G	I	G	K	V	A	A	A	L	G	A	T	L	L	L	E	H	C	K	P	D	V	I	I	N	T	G	S	A	G	G	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	G	I	I	G	A	M	Q	Q	E	V	A	I	L	K	D	L	I	E	D	V	Q	E	V	N	Q	A	G	C	T	F	Y	S	G	Q	I	Q	G	V	D	V	V	L	L	Q	S	G	I	G	K	V	S	A	A	L	G	T	A	L	L	I	S	Q	Y	A	P	D	V	V	I	N	T	G	S	A	G	G	F	D
Template Known Secondary structure								S	S									T	T										T	T									T	T										S	S																		S												S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		P	T	L	K	V	G	D	I	V	V	S	D	E	A	R	Y	H	D	A	D	V	T	A	F	G	Y	E	Y	G	Q	L	P	G	C	P	A	G	F	K	A	D	D	K	L	I	A	A	A	E	A	C	I	A	E	L	.	N	L	N	A	V	R	G	L	I	V	S	G	D	A	F	I	N	G	S	V	G	L	A	K
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		A	S	L	N	V	G	D	V	V	I	S	S	E	V	R	H	H	D	A	D	V	T	A	F	G	Y	E	I	G	Q	M	A	G	Q	P	A	A	F	K	A	D	E	K	L	M	T	V	A	E	Q	A	L	A	Q	L	P	N	T	H	A	V	R	G	L	I	C	T	G	D	A	F	V	C	T	A	E	R	Q	Q	F
Template Known Secondary structure		T	T			T	T											T	T				G	G	G	T			T	T			T	T	S		S	S																T	T	S	T	T												S	S				S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	H	N	F	P	Q	A	I	A	V	E	M	E	A	T	A	I	A	H	V	C	H	N	F	N	V	P	F	V	V	V	R	A	I	S	D	V	A	D	Q	Q	S	H	L	S	F	D	E	F	L	A	V	A	A	K	Q	S	S	L	M	V	E	S	L	V	Q	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	Q	H	F	P	S	V	V	A	V	E	M	E	A	S	A	I	A	Q	T	C	H	Q	F	K	V	P	F	V	V	V	R	A	I	S	D	V	A	D	K	E	S	P	L	S	F	E	E	F	L	P	L	A	A	K	S	S	S	A	M	V	L	K	M	V	E	L	L
Template Known Secondary structure							T	T						S	S												T													S	S	T	T																										T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions