Job Description P0AF12 Confidence 99.97% Date Thu Jan 5 11:24:52 GMT 2012 Rank 32 Aligned Residues 225 % Identity 16% Template c3bjeA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nucleoside phosphorylase, putative; PDBTitle: crystal structure of trypanosoma brucei nucleoside phosphorylase shows2 uridine phosphorylase activity Resolution 1.44 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																					.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	G	I	I	G	A	M	E	E	E	V	T	L	L	R	D	K	I	.	.	.	E	N	R	Q	T	I	S	L	G	G	C	E	I	Y	T	G	Q	L	N	G	T	E	V	A	L	L	K	S	G	I	G	K	V	A	A	A	L	G	A	T	L	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	I	I	F	V	G	D	P	G	R	V	D	V	I	S	G	Y	F	D	K	D	S	I	R	A	S	R	D	H	R	E	I	R	F	A	T	G	T	Y	K	G	T	P	V	T	V	I	S	T	G	M	G	V	D	N	I	E	I	V	L	N	E	I	H	A	L	K	E	Y	D	M	E	R	G	Q	W	R	H	R
Template Known Secondary structure		S						S	S	T	T							T	T	S		T	T									T	T									T	T										S	S																			T	T	T	T				B
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
															65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																			.	.	110	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	H	C	K	P	D	V	I	I	N	T	G	S	A	G	G	L	A	P	T	L	K	V	G	D	I	V	V	S	D	E	A	R	Y	H	D	A	D	V	T	A	F	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	G	Q	L	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	D	A	D	A	P	S	A	G	P	F	F	D	P	S	T	M	K	I	I	R	L	G	T	C	G	S	P	A	E	S	V	P	P	L	A	L	A	V	T	R	H	A	I	G	M	D	N	T	S	L	Y	Y	S	A	G	T	R	E	T	S	K	D	Q	Q	E	I	R	R	I	V	R	E	Q	T	G	L	R	A
Template Known Secondary structure		T	T		T	T	S		T	T			B			G	G	G														T	T	S		T	T												S		G	G	G	G	G	T	T	T	T	S																	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.															.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		G	C	P	A	G	F	K	A	D	D	K	L	I	A	A	A	E	A	C	I	A	E	L	.	.	.	.	.	.	.	.	.	N	L	N	A	V	R	G	L	I	V	S	G	D	A	F	I	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	G	L	A	K	I	R	H	N	F	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation
Template Sequence		I	D	I	Y	T	S	M	A	H	P	N	I	T	K	S	I	C	A	A	C	D	A	H	N	A	A	T	G	S	E	A	D	K	Q	Q	Y	V	I	G	T	T	A	T	A	S	G	F	Y	G	C	Q	G	R	R	V	G	R	F	M	K	H	L	T	V	P	N	M	V	E	E	L	G	S	L	K	F	N	L	S	N
Template Known Secondary structure		S																									T				G	G	G													S	S	S	S	G	G	G	T				G	G	G	G	G	G		S	S	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
				166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	Q	A	I	A	V	E	M	E	A	T	A	I	A	H	V	C	H	N	F	N	V	P	F	V	V	V	R	A	I	S	D	V	A	D	Q	Q	S	H	L	S	F	D	E	F	L	A	V	A	A	K	Q	S	S	L	M	V	E	S	L	V
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		G	V	E	V	V	T	N	I	E	M	E	T	S	A	I	C	Y	L	S	D	M	L	G	Y	Q	A	G	A	A	C	V	V	V	S	K	R	V	G	E	K	K	M	F	L	G	D	Q	L	D	A	A	M	K	R	C	I	K	I	I	L	E	A	L
Template Known Secondary structure											S	S												T													S	S	T	T						T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions