Job Description P0AF12 Confidence 99.98% Date Thu Jan 5 11:24:52 GMT 2012 Rank 25 Aligned Residues 226 % Identity 16% Template c2xrfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:uridine phosphorylase 2; PDBTitle: crystal structure of human uridine phosphorylase 2 Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.
Predicted Secondary structure																											.											.	.	.																													.	.	.	.	.
Query SS confidence																											.											.	.	.																													.	.	.	.	.
Query Sequence		K	I	G	I	I	G	A	M	E	E	E	V	T	L	L	R	D	K	I	E	N	R	Q	T	I	.	S	L	G	G	C	E	I	Y	T	G	.	.	.	Q	L	N	G	T	E	V	A	L	L	K	S	G	I	G	K	V	A	A	A	L	G	A	T	L	L	L	E	.	.	.	.	.	H	C	K	P	D	V	I	I
Query Conservation																											.											.	.	.																													.	.	.	.	.
Alig confidence																											.											.	.	.																													.	.	.	.	.
Template Conservation
Template Sequence		K	F	V	C	V	G	G	S	P	N	R	M	K	A	F	A	L	F	M	H	K	E	L	G	F	E	D	I	K	D	I	C	A	G	T	D	R	Y	C	M	Y	K	T	G	P	V	L	A	I	S	H	G	M	G	I	P	S	I	S	I	M	L	H	E	L	I	K	L	L	H	H	A	R	C	C	D	V	T	I	I
Template Known Secondary structure								S																T	T							T	T	T	T		S	S							T	T								S	S																		T	T		B	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		N	T	G	S	A	G	G	L	A	P	T	L	K	V	G	D	I	V	V	S	D	E	A	R	Y	H	D	A	D	V	T	A	F	G	Y	E	Y	G	Q	L	P	G	C	P	A	G	F	K	A	D	D	K	L	I	A	A	A	E	A	C	I	A	E	L	.	N	L	N	A	V	R	G	L	I	V	S	G	D	A	F
Query Conservation																																																																		.
Alig confidence											.	.																																				.	.																	.
Template Conservation											.	.																																				.	.
Template Sequence		R	I	G	T	S	G	G	I	G	.	.	I	A	P	G	T	V	V	I	T	D	I	A	V	D	S	F	F	K	P	R	F	E	Q	V	I	L	D	N	I	V	T	R	S	T	E	.	.	L	D	K	E	L	S	E	E	L	F	N	C	S	K	E	I	P	N	F	P	T	L	V	G	H	T	M	C	T	Y	D	F
Template Known Secondary structure									S	S	.	.	S		T	T											T	T	S		S							T	T								B	.	.														T	T	S	T	T												S		S
Template Predicted Secondary structure											.	.																																				.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		152													.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.															.	.																											.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.															.	.																											.
Query Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	N	G	S	V	G	L	A	K	I	R	H	N	F	P	.	.	Q	A	I	A	V	E	M	E	A	T	A	I	A	H	V	C	H	N	F	N	V	P	F	V	V	V	.	R	A	I	S	D	V	A	D	Q	Q	S	H	L	S	F	D	E	F	L	A	V	A	A	K
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.															.	.																											.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.															.	.																											.
Template Conservation
Template Sequence		Y	E	G	Q	G	R	L	D	G	A	L	C	S	F	S	R	E	K	K	L	D	Y	L	K	R	A	F	K	A	G	V	R	N	I	E	M	E	S	T	V	F	A	A	M	C	G	L	C	G	L	K	A	A	V	V	C	V	T	L	L	D	R	L	D	C	D	Q	I	N	L	P	H	D	V	L	V	E	Y	Q	Q
Template Known Secondary structure		S	G	G	G	T		S	S	S	S				S															T	T						S	S											T	T													T	T	T		S	S													T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	S	L	M	V	E	S	L	V	Q	K	L	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	Q	L	L	I	S	N	F	I	R	R	R	L	G
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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