Job Description P0AF12 Confidence 100.00% Date Thu Jan 5 11:24:52 GMT 2012 Rank 2 Aligned Residues 229 % Identity 41% Template c1zosE_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:5'-methylthioadenosine / s-adenosylhomocysteine PDBTitle: structure of 5'-methylthionadenosine/s-adenosylhomocysteine2 nucleosidase from s. pneumoniae with a transition-state3 inhibitor mt-imma Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	G	I	I	G	A	M	E	E	E	V	T	L	L	R	D	K	I	E	N	R	Q	T	I	S	L	G	G	C	E	I	Y	T	G	Q	L	N	G	T	E	V	A	L	L	K	S	G	I	G	K	V	A	A	A	L	G	A	T	L	L	L	E	H	C	K	P	D	V	I	I	N	T	G	S	A	G	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	I	G	I	I	A	A	M	P	E	E	L	A	Y	L	V	Q	H	L	D	N	T	Q	E	Q	V	V	L	G	N	T	Y	H	T	G	T	I	A	S	H	E	V	V	L	V	E	S	G	I	G	K	V	M	S	A	M	S	V	A	I	L	A	D	H	F	Q	V	D	A	L	I	N	T	G	S	A	G	A	V
Template Known Secondary structure									S	S	G	G	G	T						T										T	T									T	T										S	S														T	S			S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	T	L	K	V	G	D	I	V	V	S	D	E	A	R	Y	H	D	A	D	V	T	A	F	G	Y	E	Y	G	Q	L	P	G	C	P	A	G	F	K	A	D	D	K	L	I	A	A	A	E	A	C	I	A	E	L	N	L	N	A	V	R	G	L	I	V	S	G	D	A	F	I	N	G	S	V	G	L	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	G	I	A	V	G	D	V	V	I	A	D	K	L	A	Y	H	D	V	D	V	T	A	F	G	Y	A	Y	G	Q	M	A	Q	Q	P	L	Y	F	E	S	D	K	T	F	V	A	Q	I	Q	E	S	L	S	Q	L	D	Q	N	W	H	L	G	L	I	A	T	G	D	S	F	V	A	G	N	D	K	I	E	A
Template Known Secondary structure		S	T	T			T	T											S	S				G	G	G	T			T	T			T	T	S		S																S		T	T		T	T										S	S				S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	H	N	F	P	Q	A	I	A	V	E	M	E	A	T	A	I	A	H	V	C	H	N	F	N	V	P	F	V	V	V	R	A	I	S	D	V	A	D	Q	Q	S	H	L	S	F	D	E	F	L	A	V	A	A	K	Q	S	S	L	M	V	E	S	L	V	Q	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	S	H	F	P	E	V	L	A	V	E	M	E	G	A	A	I	A	Q	A	A	H	T	L	N	L	P	V	L	V	I	R	A	M	S	D	N	A	N	H	E	A	N	I	F	F	D	E	F	I	I	E	A	G	R	R	S	A	Q	V	L	L	A	F	L	K	A	L
Template Known Secondary structure							T	T						S	S											T	T													S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions