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Job DescriptionP0AF12
Confidence99.97%DateThu Jan 5 11:24:52 GMT 2012
Rank26Aligned Residues227
% Identity16%Templatec1wtaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:5'-methylthioadenosine phosphorylase; PDBTitle: crystal structure of 5'-deoxy-5'-methylthioadenosine from aeropyrum2 pernix (r32 form)
Resolution1.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30.. .......40....... ..50. ........60.........70.
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Query Sequence  KIGIIGAMEE. EVTLLRDKIENRQTISLGGCE. . IYTGQLNGTEVALLK. SGIG. . . . . . KVAAALGATLLLEHCKPDVI
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Template Sequence  HVGVIGGSGLYDPGIVENPVEVKVSTPYGNPSDFIVVGDVAGVKVAFLPRHGRGHRIPPHAINYRA. NIWALKALGVKWV
Template Known Secondary structure  S
GGG

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   13......20.........30.........40.........50.........60.........70........ .80.........90.
 
   72.......80.........90.........100.... .....110.........120.........130.........140... ....
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Query Sequence  INTGSAGGLAPTLKVGDIVVSDEARYHDADVTA. FGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRG. . . LIVS
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Template Sequence  ISVSAVGSLREDYRPGDFVVPDQFIDMTKNRRHYTFYDGPVTVHVSMADPFCEDLRQRLIDSGRRLGYTVHERGTYVCIE
Template Known Secondary structure  SSTTS
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   148.150.........160.........170.........180.........190......... 200.........210.........220...
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Query Sequence  GDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVA. . . . DQQSHLSFDEFLAVAAKQSSLMVE
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Template Sequence  GPRFSTRAESR. . VWKDVFKADIIGMTLVPEINLACEAQLCYATLAMVTDYDVWADRPVTAEEVERVMISNVERARRMLY
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   172.......180.. .......190.........200.........210.........220.........230.........240.........
 
   224.....230.
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Query Sequence  SLVQKLAH
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Template Sequence  DVIPKLAG
Template Known Secondary structure  GGG
SS
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   250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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