Job Description Q6BEX5 Confidence 3.73% Date Thu Jan 5 12:37:25 GMT 2012 Rank 21 Aligned Residues 48 % Identity 17% Template d2eiaa2 SCOP info Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Resolution 2.70

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	F	L	L	F	T	L	L	T	L	S	T	V	P	A	Q	A	D	I	I	D	D	T	I	G	N	I	Q	Q	A	I	N	D	A	Y	N	P	D	R	G	R	D	Y	E	D	S	R	D	D	G	W	Q	R
Query Conservation
Alig confidence																																.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		A	S	Q	N	L	F	G	I	L	S	V	D	C	T	S	E	E	M	N	A	F	L	D	V	V	P	G	Q	A	G	.	.	.	.	.	.	Q	K	Q	I	L	L	D	A	I	D	K	I	A	D	D	W	D	N
Template Known Secondary structure												T	T												S	S				T		.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions