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Job DescriptionP0ABA6
Confidence100.00%DateThu Jan 5 11:15:03 GMT 2012
Rank7Aligned Residues187
% Identity32%Templatec3fksY_
PDB info PDB header:hydrolaseChain: Y: PDB Molecule:atp synthase subunit gamma, mitochondrial; PDBTitle: yeast f1 atpase in the absence of bound nucleotides
Resolution3.59 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVV
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Template Sequence  ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAI. . . . . . . . . . . . . . . . . . . . . . . . . . . . TLAK
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   1........10.........20.........30.........40........ .50..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  STDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYD
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Template Sequence  AVRRHLNDQPN. . . . . . . . . . . . . . . . . . . . . . . VTIDKIKMQLLRTHPNN. . . . . . GIGDAPTFQESALIADKL. . . . .
Template Known Secondary structure  SGGGTT


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   94.....100.... .....110.........120. ........130.........
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  EGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQA
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Template Sequence  . . . LSVMKAFYNDPVSSLSFEPS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELFEYTLANQMLTAMAQGYAAEIS
Template Known Secondary structure  ...GGTT




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   151........160.........170 .........180.........190....
 
   242.......250.........260.........270.........280......
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Query Sequence  ARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAA
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Template Sequence  ARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS
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   232.......240.........250.........260.........270......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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