Job Description P0ABG1 Confidence 38.42% Date Thu Jan 5 11:15:26 GMT 2012 Rank 9 Aligned Residues 222 % Identity 13% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	L	P	P	V	G	F	A	I	V	T	L	V	V	C	M	L	A	A	W	E	W	G	Q	L	S	G	F	T	T	R	S	Q	R	V	W	L	A	V	L	C	G	L	L	L	A	L	M	L	F	L	L	P	E	Y	H	R	N	I	H	Q	P	L	V	E	I	S	L	W	A	S	L	G	W	W	I	V	A
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		V	E	N	L	I	N	A	D	F	C	V	A	S	V	C	V	A	F	G	A	V	L	G	.	.	.	.	.	K	V	S	P	I	Q	L	L	I	M	T	F	F	Q	V	T	L	F	A	V	N	E	F	I	L	L	N	L	L	K	V	K	D	A	G	G	S	M	T	I	H	T	F	G	A	Y	F	G	L	T	V	T
Template Known Secondary structure																							T	T	.	.	.	.	.	S	S																									T	T	S					T	T		T	T	T	T
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	V	L	F	Y	P	G	S	A	A	I	W	R	N	S	K	T	L	R	L	I	F	G	V	L	T	I	V	P	F	F	W	G	M	L	A	L	R	A	W	H	Y	D	E	N	H	Y	S	G	A	I	W	L	L	Y	V	M	I	L	V	W	G	A	D	S	G	A	Y	M	F	G	K	L	F	G	K	H	K
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		R	I	L	Y	R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	G	D	S	Q	.	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H	K	K	G
Template Known Secondary structure				T			T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S					.																									T	S	T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																						.																																				.
Query SS confidence																						.																																				.
Query Sequence		L	A	P	K	V	S	P	G	K	T	W	Q	G	F	I	G	G	L	A	T	.	A	A	V	I	S	W	G	Y	G	M	W	A	N	L	D	V	A	P	V	T	L	L	I	C	S	I	V	A	A	L	A	S	V	L	G	.	D	L	T	E	S	M	F	K	R	E	A	G	I	K	D	S	G	H	L	I	P	G	H
Query Conservation																						.																																				.
Alig confidence		.	.	.																		.						.	.	.	.	.	.	.	.																							.
Template Conservation		.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		.	.	.	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	.	.	.	.	.	.	.	.	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H
Template Known Secondary structure		.	.	.										G	G	G						T	T	T	T	T	T	.	.	.	.	.	.	.	.	T		S																																				T	T						T
Template Predicted Secondary structure		.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
					276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.									.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		258
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		345

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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