Job Description P0ABG1 Confidence 93.74% Date Thu Jan 5 11:15:26 GMT 2012 Rank 1 Aligned Residues 150 % Identity 15% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	L	L	L	V	L	F	Y	P	G	S	A	A	I	W	R	N	S	K	T	L	R	L	I	F	G	V	L	T	I	V	P	F	F	W	G	M	L	A	L	R	A	W	H	Y	D	E	N	H	Y	S	G	A	I	W	L	L	Y	V	M	I	L	V	W	G	A	D	S	G	A	Y	M	F	G	K	L	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	G	L	G	V	S	I	A	L	T	T	A	A	Q	R	A	Q	P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H
Template Known Secondary structure																		T	S																													T	T	S		G	G	G																											T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		K	H	K	L	A	P	K	V	S	P	G	K	T	W	Q	G	F	I	G	G	L	A	T	A	A	V	I	S	W	G	Y	G	M	W	A	N	L	D	V	A	P	V	T	L	L	I	C	S	I	V	A	A	L	A	S	V	L	G	.	D	L	T	E	S	M	F	K	R	E	A	G	I	K	D	S	G	H	L	I	P
Query Conservation																																																												.
Alig confidence					.	.	.	.																						.	.	.	.	.	.	.	.																							.
Template Conservation					.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		K	G	K	.	.	.	.	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S	V	C	.	.	.	.	.	.	.	.	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N
Template Known Secondary structure		T	T		.	.	.	.										T	T							T	T	T	T	.	.	.	.	.	.	.	.	T	T	S																						T									S					T	T
Template Predicted Secondary structure					.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.									.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		256	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	G
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions