Job Description P0ABG1 Confidence 16.04% Date Thu Jan 5 11:15:26 GMT 2012 Rank 37 Aligned Residues 146 % Identity 10% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	V	A	L	L	L	V	L	F	Y	P	G	S	A	A	I	W	R	N	S	K	T	L	R	L	I	F	G	V	L	T	I	V	P	F	F	W	G	M	L	A	L	R	A	W	H	Y	D	E	N	H	Y	S	G	A	I	W	L	L	Y	V	M	I	L	V	W	G	A	D	S	G	A	Y	M	F	G	K	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	A	L	A	V	A	M	T	I	G	K	R	A	G	F	E	E	Y	S	I	E	P	H	S	I	P	L	T	L	I	G	A	A	L	L	W	F	G	W	F	G	F	N	G	G	S	A	L	A	A	N	D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K
Template Known Secondary structure															T	T	T	T	T	S					S																						G	G	G	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	H	K	L	A	P	K	V	S	P	G	K	T	W	Q	G	F	I	G	G	L	A	T	A	A	V	I	S	W	G	Y	G	M	W	A	N	L	D	V	A	P	V	T	L	L	I	C	S	I	V	A	A	L	A	S	V	L	G	D	L	T	E	S	M	F	K	R	E	A	G	I	K	D	S	G	H	L	I	P
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.																										.	.	.	.																				.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.																										.	.	.	.																				.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	K	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	.	.	.	.	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	.	.	.	.	M	D	F	R	I	K	K	K	I	D	E	S	L	D	A	W	A
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.																			T	T	T	T	T	T		.	.	.	.																				.	.	.	.							T	T				T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																										.	.	.	.																				.	.	.	.
Template SS confidence
		242											.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		256	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	H	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions