Return to main results Retrieve Phyre Job Id

Job DescriptionQ47138
Confidence6.86%DateThu Jan 5 12:36:15 GMT 2012
Rank26Aligned Residues32
% Identity22%Templated1hdma2
SCOP infoMHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.... .....80.........90........
Predicted Secondary structure 









.











Query SS confidence 









.























Query Sequence  PGIPRPALDS. WDAEYMQENRWDEESASFVPVETE
Query Conservation   
 





 .


 

  
 



     
    
Alig confidence 









.














..






Template Conservation    


  

 


 



 


   
.. 




 
Template Sequence  DGSPSVGLSEAYDEDQLFFFDFSQNT. . RVPRLPE
Template Known Secondary structure  SSSSSTTTTTT..SSGG
Template Predicted Secondary structure 












..






Template SS confidence 


































   26...30.........40.........50. .......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions