Job Description Q47138 Confidence 3.27% Date Thu Jan 5 12:36:15 GMT 2012 Rank 64 Aligned Residues 65 % Identity 12% Template c1lshA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:lipovitellin (lv-1n, lv-1c); PDBTitle: lipid-protein interactions in lipovitellin Resolution 1.90 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		K	L	A	P	E	V	Q	N	A	V	M	V	K	F	D	T	C	E	N	I	T	V	D	M	V	I	S	A	Q	E	L	L	Q	E	D	M	A	.	.	.	T	F	D	G	H	I	V	E	A	L	M	K	M	P	E	V	N	A	M	Y	P	E	L	K	L	H	A	I
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.
Template Conservation
Template Sequence		A	I	K	S	E	L	R	I	R	S	C	I	V	F	F	E	S	K	P	S	V	A	L	V	S	M	V	A	V	R	L	R	R	E	P	N	L	Q	V	A	S	F	V	Y	S	Q	M	R	S	L	S	R	S	S	N	P	E	F	R	D	V	A	A	A	C	S	V	A
Template Known Secondary structure		T	S															T															T	T		S																T	T			S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions