Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 22 Aligned Residues 290 % Identity 18% Template d1ve5a1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	F	P	R	L	E	F	I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	G	R	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	A	D	T	L	I	T	A	G	A	I	Q	S	N	H	V	R	Q	T	A
Query Conservation
Alig confidence																																									.	.																						.	.	.	.
Template Conservation																																									.	.																						.	.	.	.
Template Sequence		Y	A	A	F	R	R	I	A	P	Y	T	H	R	T	P	L	L	T	S	R	L	L	D	G	L	L	G	K	R	L	L	L	K	A	E	H	L	Q	K	.	.	T	G	S	F	K	A	R	G	A	L	S	K	A	L	A	L	E	N	P	K	G	.	.	.	.	L	L	A	V	S	S	G	N	H	A	Q	G	V	A
Template Known Secondary structure									G	G	G	S															T	T	S							G	G	G	S	G	.	.	G	G	B	T												S	S	S				.	.	.	.						S	S
Template Predicted Secondary structure																																									.	.																						.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	A	K	L	G	L	H	C	V	A	L	L	E	N	P	I	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P	V	G	G	S	N	A	L	G
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.														.	.	.																					.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.														.	.	.																					.	.
Template Sequence		Y	A	A	Q	V	L	G	V	K	A	L	V	V	M	P	E	D	P	Y	K	K	A	C	A	R	A	.	.	.	.	.	.	.	.	.	.	Y	G	A	E	V	V	D	R	G	V	T	A	K	.	.	.	N	R	E	E	V	A	R	A	L	Q	E	E	T	G	Y	A	L	I	H	P	.	.	F	D	D	P	L	V
Template Known Secondary structure								T																				.	.	.	.	.	.	.	.	.	.	T	T						T	T			T	T	.	.	.	T																			S	.	.	S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.														.	.	.																					.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.								230	.	.	.	.	.	.	.
Predicted Secondary structure																			.																																																.	.	.	.	.	.	.
Query SS confidence																			.																																																.	.	.	.	.	.	.
Query Sequence		A	L	G	Y	V	E	S	A	L	E	I	A	Q	Q	C	E	G	.	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	.	.	.	.	.	.	.	K	V	V	N	L	Q	Q	A
Query Conservation																			.																																																.	.	.	.	.	.	.
Alig confidence																			.																																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	G	Q	G	T	A	G	L	E	L	L	A	Q	A	G	R	M	G	V	F	P	G	A	V	L	A	P	V	G	G	G	G	L	L	A	G	L	A	T	A	V	K	A	L	S	P	T	T	L	V	L	G	V	E	P	E	A	A	D	D	A	K	R	S	L	E	A	G	R	I	L	R	L	E	A	P	P	R	T
Template Known Secondary structure																				T				S							S	S	S															T	T	S								G	G	G										T	S					S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		I	A	K	E	L	E	L	.	.	T	A	S	A	E	I	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	I	D	G	I	S	Q	K	R	F	K	D	E	G	P	I	L	F	I	H	T
Query Conservation									.	.
Alig confidence									.	.																																											.														.	.	.	.
Template Conservation																																																					.														.	.	.	.
Template Sequence		R	A	D	G	V	R	T	L	S	L	G	E	R	T	F	P	I	L	R	E	R	V	D	G	I	L	T	V	S	E	E	A	L	L	E	A	E	R	L	L	F	T	R	T	K	Q	V	V	E	P	T	.	G	A	L	P	L	A	A	V	L	E	H	G	A	.	.	.	.	R	L	P	Q	T	L	A	L	L	L	S
Template Known Secondary structure		S		G	G	G			S	S			T	T	T																														T						G	G	.	G	G										G	G	.	.	.	.	G	S		S
Template Predicted Secondary structure																																																					.														.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.
		316	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	A	P	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	N	R	D	F
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions