Job Description P76316 Confidence 99.97% Date Thu Jan 5 12:21:44 GMT 2012 Rank 39 Aligned Residues 273 % Identity 17% Template d1vb3a1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.20

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.
Predicted Secondary structure																																											.	.	.																														.
Query SS confidence																																											.	.	.																														.
Query Sequence		P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	G	R	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	.	.	.	A	A	D	A	L	R	E	G	A	D	T	L	I	T	A	G	A	I	Q	S	N	H	V	R	Q	T	A	A	V	.	A	A	K	L	G	L
Query Conservation																																											.	.	.																														.
Alig confidence									.	.	.	.	.	.	.								.	.																			.	.	.															.	.														.
Template Conservation									.	.	.	.	.	.	.								.	.																																				.	.
Template Sequence		P	A	P	V	A	N	V	.	.	.	.	.	.	.	E	S	D	V	G	C	L	.	.	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	V	T	I	L	T	.	.	A	T	S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V
Template Known Secondary structure									.	.	.	.	.	.	.		T	T					.	.					S	T	T	S	B	T																T	T	T								.	.			S	S	S									T	T	T		T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.								.	.																																				.	.
Template SS confidence
		83	.	.	.	.	.	.								90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		94	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure											.																											.	.
Query SS confidence											.																											.	.
Query Sequence		H	C	V	A	L	L	E	N	P	.	I	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	.	.	C	D	A	L	T	D	P	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P	V	G	G	S	N	A	L	G	A	L	G	Y	V
Query Conservation											.																											.	.
Alig confidence											.												.	.	.	.	.	.	.	.								.	.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	.	.	.	.	.	.	.	.	L	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L	K	V	A	L	G	L	N	S	A	N	S	I	N	I	S	R	L	L	A	Q	I
Template Known Secondary structure									T	T		S										S	.	.	.	.	.	.	.	.			T	T								S												G	G	G									T					S	T	T	S							T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure															.																																												.	.	.	.	.
Query SS confidence															.																																												.	.	.	.	.
Query Sequence		E	S	A	L	E	I	A	Q	Q	C	E	G	A	.	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	.	.	.	.	.	Q	L	P	K	V	V	N	L	Q	Q	A	I	A	K	E	L	E	L
Query Conservation															.																																												.	.	.	.	.
Alig confidence															.																																												.	.	.	.	.
Template Conservation
Template Sequence		C	Y	Y	F	E	A	V	A	Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	G	L	P	V	K	R	F	I	A	A	T	N	V	N	D	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	A	T	Q	A	T	L	S	N	A	M	D	V
Template Known Secondary structure									T	T	S		T	T	T	T	T	S								S	S													T	T				S								S											S											S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		245	.	.	.	.	250	.					.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure									.	.	.	.									.	.	.	.	.
Query SS confidence									.	.	.	.									.	.	.	.	.
Query Sequence		T	A	S	A	E	I	L	.	.	.	.	L	W	D	D	Y	F	A	P	.	.	.	.	.	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	I	D	G	I	S	Q	K	R	F	K	D	E	G	P	I	L	F	I	H	T
Query Conservation									.	.	.	.									.	.	.	.	.
Alig confidence									.	.	.	.									.	.	.	.	.																			.								.													.	.	.	.	.
Template Conservation																																												.								.													.	.	.	.	.
Template Sequence		S	Q	P	N	N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	Y	T	S	E	P	.	H	A	A	V	A	Y	R	A	L	R	D	Q	.	.	.	.	.	L	N	P	G	E	Y	G	L	F	L	G	T
Template Known Secondary structure		S	S		T	T											T	T			G	G	G	S																				.	T	T						.											T	T	.	.	.	.	.			T	T
Template Predicted Secondary structure																																												.								.													.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.						.	.	.	.	.	370	.	.	.	.	.	.
		316
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		377

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions