Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 33 Aligned Residues 302 % Identity 20% Template d1v8za1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.21

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		F	I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	.	G	R	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	A	D	T	L	I	T	A	G	A	I	Q	S	N	H	V	R	Q	T	A	A	V	A	A	K	L	G
Query Conservation																				.
Alig confidence																				.														.	.																												.
Template Conservation																																		.	.																												.
Template Sequence		W	A	G	R	P	T	P	L	Y	Y	A	K	R	L	T	E	K	I	G	G	A	K	I	Y	L	K	R	E	D	L	V	H	.	.	G	G	A	H	K	T	N	N	A	I	G	Q	A	L	L	A	K	F	M	G	K	T	R	L	I	A	E	.	T	G	A	G	Q	H	G	V	A	T	A	M	A	G	A	L	L	G
Template Known Secondary structure		T	T			S														T	S	S							G	G	G	S	T	.	.	T	S	B	T															T	T								.		S	S	S													T	T
Template Predicted Secondary structure																																		.	.																												.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.
Predicted Secondary structure																																																.																												.	.	.	.	.
Query SS confidence																																																.																												.	.	.	.	.
Query Sequence		L	H	C	V	A	L	L	E	N	P	I	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	N	A	Q	.	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P	V	G	G	S	N	A	L	G	.	.	.	.	.	A
Query Conservation																																																.																												.	.	.	.	.
Alig confidence																							.	.	.	.	.																					.																												.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		M	K	V	D	I	Y	M	G	A	E	D	V	E	R	Q	K	M	N	V	F	R	.	.	.	.	.	M	K	L	L	G	A	N	V	I	P	V	N	S	G	S	R	T	L	K	D	A	I	N	E	A	L	R	D	W	V	A	T	F	E	Y	T	H	Y	L	I	G	S	V	V	G	P	H	P	Y	P	T	I	V	R
Template Known Secondary structure														T	T								.	.	.	.	.				T	T								S	T	T	S	S																T	T	T							S	S		S	S	T	T
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																		.	.																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																																																						.	.	.	.	.	.	.	.	.
Query Sequence		L	G	Y	V	E	S	A	L	E	I	A	Q	Q	C	E	G	.	.	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	K	V	V	N	L	Q	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.																																																						.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																										.																												.	.	.	.	.	.	.	.	.
Template Conservation																																													.
Template Sequence		D	F	Q	S	V	I	G	R	E	A	K	A	Q	I	L	E	A	E	G	Q	L	P	D	V	I	V	A	C	V	G	G	G	S	N	A	M	G	I	F	Y	P	F	V	.	N	D	K	K	V	K	L	V	G	V	E	A	G	G	K	G	L	E	S	G	K	H	S	A	S	L	N	A	G	Q	V	G	V	F	H	G
Template Known Secondary structure																				S	S			S							S	S	S								G	G	G	T	.	T		T	T	S										T	B	G	G	G	T	B	S													T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
																		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	I	A	K	E	L	E	L	T	A	S	A	E	I	.	.	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	I	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																																				.
Template Conservation																																																																						.
Template Sequence		M	L	S	Y	F	L	Q	D	E	E	G	Q	I	K	P	T	H	S	I	A	P	G	L	D	Y	P	G	V	G	P	E	H	A	Y	L	K	K	I	Q	R	A	E	Y	V	T	V	T	D	E	E	A	L	K	A	F	H	E	L	S	R	T	E	G	I	I	P	A	L	.	E	S	A	H	A	V	A	Y	A	M	K
Template Known Secondary structure								B		T	T	S		B						S	S	T	T	S			S	B											T	T	S																							S			B			.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		G	I	S	Q	K	R	F	K	D	E	G	P	I	L	F	I	H	T	G	.	G	A	P	A	L	F	A	Y	H	P	H
Query Conservation																					.
Alig confidence						.	.														.
Template Conservation						.	.
Template Sequence		L	A	K	E	.	.	M	S	R	D	E	I	I	I	V	N	L	S	G	R	G	D	K	D	L	D	I	V	L	K	V
Template Known Secondary structure					T	.	.	S		T	T									B	B	S	G	G	G
Template Predicted Secondary structure						.	.
Template SS confidence
		356	.	.	.			360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions