Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 2 Aligned Residues 322 % Identity 32% Template d1f2da_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																														.	.														.
Query SS confidence																														.	.														.
Query Sequence		L	T	R	F	P	R	L	E	F	I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	G	R	.	.	E	I	F	I	K	R	D	D	V	T	P	M	A	.	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	A	D	T	L	I	T	A	G	A	I	Q	S	N	H	V	R
Query Conservation																														.	.														.
Alig confidence																														.	.														.
Template Conservation
Template Sequence		V	A	K	F	A	K	Y	P	L	T	F	G	P	S	P	I	S	N	L	N	R	L	S	Q	H	L	G	S	K	V	N	V	Y	A	K	R	E	D	C	N	S	G	L	A	F	G	G	N	K	L	R	K	L	E	Y	I	V	P	D	I	V	E	G	D	Y	T	H	L	V	S	I	G	G	R	Q	S	N	Q	T	R
Template Known Secondary structure		T	T	S	S						S	S	S	S													T	T	T		S							G	G	G	S		S	S	T	T									T	T	T							S			S								T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.																						.	.
Query SS confidence																																		.	.	.																						.	.
Query Sequence		Q	T	A	A	V	A	A	K	L	G	L	H	C	V	A	L	L	E	N	P	I	G	T	T	A	E	N	Y	L	T	N	G	.	.	.	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	.	.	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P
Query Conservation																																		.	.	.																						.	.
Alig confidence																																		.	.	.																						.	.
Template Conservation
Template Sequence		M	V	A	A	L	A	A	K	L	G	K	K	C	V	L	I	Q	E	D	W	V	P	I	P	E	A	E	K	D	V	Y	N	R	V	G	N	I	E	L	S	R	I	M	G	A	D	V	R	V	I	E	D	G	F	D	I	G	M	R	K	S	F	A	N	A	L	Q	E	L	E	D	A	G	H	K	P	Y	P	I	P
Template Known Secondary structure											T											S				G	G	G	T	T	T	T	T	T	S									T	T												S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		158	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure						.																						.
Query SS confidence						.																						.
Query Sequence		V	G	G	S	.	N	A	L	G	A	L	G	Y	V	E	S	A	L	E	I	A	Q	Q	C	E	G	.	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	K	V	V	N	L	Q
Query Conservation						.																						.
Alig confidence						.																						.
Template Conservation
Template Sequence		A	G	C	S	E	H	K	Y	G	G	L	G	F	V	G	F	A	D	E	V	I	N	Q	E	V	E	L	G	I	K	F	D	K	I	V	V	C	C	V	T	G	S	T	T	A	G	I	L	A	G	M	A	Q	Y	G	R	Q	D	D	V	I	A	I	D	A	S	F	T	S	E	K	T	K	E	Q	T	L	R	I	A
Template Known Secondary structure		G	G	G	T	T	S	T	T	T	T	T																	T				S							S	S	S											G	G	G	T		G	G	G							S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		236	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		Q	A	I	A	K	E	L	E	L	.	T	A	S	A	E	I	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	I	D	G	I	S	Q	K	R	F	K	D	E	G	P	I	L	F	I	H
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		N	N	T	A	K	L	I	G	V	E	H	E	F	K	D	F	T	L	D	T	R	F	A	Y	P	C	Y	G	V	P	N	E	G	T	I	E	A	I	R	T	C	A	E	Q	E	G	V	L	T	D	P	V	Y	E	G	K	S	M	Q	G	L	I	A	L	I	K	E	D	Y	F	K	P	G	A	N	V	L	Y	V	H
Template Known Secondary structure									T						S							T	T	S	T	T	B	T	T	B																	S					T	T	T														T	T		S		T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	G	A	P	A	L	F	A	Y	H	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	G	A	P	A	L	S	A	Y	S	S	F
Template Known Secondary structure					G	G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions