Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 5 Aligned Residues 300 % Identity 18% Template c3l6cA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:serine racemase; PDBTitle: x-ray crystal structure of rat serine racemase in complex with2 malonate a potent inhibitor Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.
Predicted Secondary structure										.																																																											.	.	.	.
Query SS confidence										.																																																											.	.	.	.
Query Sequence		M	P	L	H	N	L	T	R	.	F	P	R	L	E	F	I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	G	R	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	.	.	.	.	A	D	T	L	I	T	A	G	A
Query Conservation										.																																																											.	.	.	.
Alig confidence										.																																					.	.																					.	.	.	.							.	.
Template Conservation																																															.	.																															.	.
Template Sequence		I	S	F	A	D	V	E	K	A	H	L	N	I	Q	D	S	V	H	L	T	P	V	L	T	S	S	I	L	N	Q	I	A	G	R	N	L	F	F	K	C	E	L	F	Q	K	.	.	T	G	S	F	K	I	R	G	A	L	N	A	I	R	G	L	I	P	D	T	L	E	G	K	P	K	A	V	V	T	.	.	H
Template Known Secondary structure															T	T	T	S																T	S							G	G	G	S	G	.	.	G	G	B	T	T												S		S	S	S	T	T			S					.	.
Template Predicted Secondary structure																																															.	.																															.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	S	N	H	V	R	Q	T	A	A	V	A	A	K	L	G	L	H	C	V	A	L	L	E	N	P	I	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.														.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.														.	.	.
Template Sequence		S	S	G	N	H	G	Q	A	L	T	Y	A	A	K	L	E	G	I	P	A	Y	I	V	V	P	Q	T	A	P	N	C	K	K	L	A	I	Q	A	.	.	.	.	.	.	.	.	Y	G	A	S	I	V	Y	S	E	P	S	D	E	.	.	.	S	R	E	N	V	A	Q	R	I	I	Q	E	T	E	G	I	L	V
Template Known Secondary structure			S	S													T	T									T	T	S											.	.	.	.	.	.	.	.	T	T								S	S			.	.	.														T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		I	P	V	G	G	S	N	A	L	G	A	L	G	Y	V	E	S	A	L	E	I	A	Q	Q	C	E	G	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	K	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence				.	.																								.	.	.																																														.	.	.	.	.
Template Conservation				.	.																								.	.	.
Template Sequence		H	P	.	.	N	Q	E	P	A	V	I	A	G	Q	G	T	I	A	L	E	V	L	N	Q	V	P	L	.	.	.	V	D	A	L	V	V	P	V	G	G	G	G	M	V	A	G	I	A	I	T	I	K	T	L	K	P	S	V	K	V	Y	A	A	E	P	S	N	A	D	D	C	Y	Q	S	K	L	K	G	E	L
Template Known Secondary structure			S	.	.	S	S	S								T											T	T	.	.	.									S	S	S															T	T	S								G	G	G										T	S
Template Predicted Secondary structure				.	.																								.	.	.
Template SS confidence
		152	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
				231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																				.
Query SS confidence		.	.																				.
Query Sequence		.	.	V	V	N	L	Q	Q	A	I	A	K	E	L	E	L	T	A	S	A	E	.	I	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	I	D	G	I	S	Q	K	R	F	K	D	E
Query Conservation		.	.																				.
Alig confidence		.	.																				.																																					.
Template Conservation																																																												.
Template Sequence		T	P	N	L	H	P	P	E	T	I	A	D	G	V	K	S	S	I	G	L	N	T	W	P	I	I	R	D	L	V	D	D	V	F	T	V	T	E	D	E	I	K	Y	A	T	Q	L	V	W	E	R	M	K	L	L	I	E	P	.	T	A	G	V	G	L	A	A	V	L	S	Q	H	F	Q	T	V	S	P	E	V
Template Known Secondary structure					S	S					S		G	G	G		S				T	T	T																																				G	.	G	G	G							T	S	T	G	G	G	G	S		T	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	I	L	F	I	H	T	G	G	A	P	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	I	C	I	V	L	S	G	G	N	V	D	L
Template Known Secondary structure										B					S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions