Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 6 Aligned Residues 294 % Identity 19% Template c3iauA_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine deaminase; PDBTitle: the structure of the processed form of threonine deaminase isoform 22 from solanum lycopersicum Resolution 2.35 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	E	F	I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	G	R	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	A	D	T	L	I	T	A	G	A	I	Q	S	N	H	V	R	Q	T	A	A	V	A	A	K
Query Conservation
Alig confidence																																				.	.						.																						.
Template Conservation																																				.	.						.																						.
Template Sequence		P	V	Y	D	V	A	I	E	S	P	L	E	L	A	E	K	L	S	D	R	L	G	V	N	F	Y	I	K	R	E	D	K	Q	R	.	.	V	F	S	F	L	.	R	G	A	Y	N	M	M	S	N	L	S	R	E	E	L	D	K	G	V	I	T	.	A	S	A	G	N	H	A	Q	G	V	A	L	A	G	Q	R
Template Known Secondary structure			G	G	G	T																	T	S							G	G	G	S	T	.	.	T	S	B			.									T	S												.			S	S
Template Predicted Secondary structure																																				.	.						.																						.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	H	C	V	A	L	L	E	N	P	I	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P	V	G	G	S	N	A	L	G	A	L	G	Y	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.														.	.	.																					.	.
Template Conservation																									.	.	.	.	.	.	.	.														.	.	.																					.	.
Template Sequence		L	N	C	V	A	K	I	V	M	P	T	T	T	P	Q	I	K	I	D	A	V	R	A	.	.	.	.	.	.	.	.	L	G	G	D	V	V	L	Y	G	K	T	F	D	.	.	.	E	A	Q	T	H	A	L	E	L	S	E	K	D	G	L	K	Y	I	P	P	.	.	F	D	D	P	G	V	I	K	G	Q	G
Template Known Secondary structure		T	T									T	T												.	.	.	.	.	.	.	.	T	T								S	S			.	.	.														T						S	.	.	S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.														.	.	.																					.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		E	S	A	L	E	I	A	Q	Q	C	E	G	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	K	V	V	N	L	Q	.	.	.	.	.	.	Q	A	I	A	K	E	L	E	L
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence														.	.	.																																																			.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		T	I	G	T	E	I	N	R	Q	L	K	D	.	.	.	I	H	A	V	F	I	P	V	G	G	G	G	L	I	A	G	V	A	T	F	F	K	Q	I	A	P	N	T	K	I	I	G	V	E	P	Y	G	A	A	S	M	T	L	S	L	H	E	G	H	R	V	K	L	S	N	V	D	T	F	A	D	G	V	A	V
Template Known Secondary structure													S	.	.	.									S	S	S														S	T	T	S								G	G	G										T	S					S					S	S	G	G	G
Template Predicted Secondary structure														.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		245	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		T	A	S	A	E	.	.	I	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	I	D	G	I	S	Q	K	R	F	K	D	E	G	P	I	L	F	I	H	T	G	G	A	P	A	L	F
Query Conservation							.	.
Alig confidence							.	.																																					.																			.
Template Conservation																																													.																			.
Template Sequence		A	L	V	G	E	Y	T	F	A	K	C	Q	E	L	I	D	G	M	V	L	V	A	N	D	G	I	S	A	A	I	K	D	V	Y	D	E	G	R	N	I	L	E	T	.	S	G	A	V	A	I	A	G	A	A	A	Y	C	E	F	Y	K	I	.	K	N	E	N	I	V	A	I	A	S	G	A	N	M	D	F	S
Template Known Secondary structure		S	S																																				S						.																T	T		.		S									B					G	G
Template Predicted Secondary structure																																													.																			.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		323	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	H	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	H	K
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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