Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 23 Aligned Residues 294 % Identity 20% Template c2zsjB_ PDB info PDB header:lyase Chain: B: PDB Molecule:threonine synthase; PDBTitle: crystal structure of threonine synthase from aquifex aeolicus vf5 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		M	P	L	H	N	L	T	R	F	P	R	L	E	F	I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	G	R	.	.	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	A	D	T	L	I	T	A	G	A	I	Q	S
Query Conservation																																			.	.
Alig confidence							.	.																											.	.												.	.																											.	.
Template Conservation							.	.																																								.	.																											.	.
Template Sequence		L	P	V	D	E	.	.	N	T	P	I	V	T	L	Y	E	G	N	T	P	L	I	E	A	D	N	L	A	R	A	I	G	F	K	G	K	I	Y	L	K	Y	E	G	L	N	P	.	.	T	G	S	F	K	D	R	G	M	T	L	A	I	S	K	A	V	E	A	G	K	R	A	V	I	C	.	.	A	S	T	G
Template Known Secondary structure		S	S			T	.	.	T	S																							T		S	S							G	G	G	S	T	.	.	T	S	B	T															T	T		S					.	.			S	S
Template Predicted Secondary structure							.	.																																								.	.																											.	.
Template SS confidence
		15	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		N	H	V	R	Q	T	A	A	V	A	A	K	L	G	L	H	C	V	A	L	L	E	N	P	I	.	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P
Query Conservation																											.
Alig confidence																											.											.	.	.	.	.	.	.	.														.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.														.	.	.
Template Sequence		N	T	S	A	S	A	A	A	Y	A	A	R	A	G	L	R	A	Y	V	L	L	P	K	G	A	V	A	I	G	K	L	S	Q	A	M	I	.	.	.	.	.	.	.	.	Y	G	A	K	V	L	A	I	Q	G	T	F	D	.	.	.	D	A	L	N	I	V	R	K	I	G	E	N	F	P	V	E	I	V	N	S
Template Known Secondary structure														T	T									T	T	T			G	G	G	T						.	.	.	.	.	.	.	.	T	T							S	S				.	.	.													S	S					S	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																									.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.
Query Sequence		V	G	G	S	N	A	L	G	A	L	G	Y	V	E	S	A	L	E	I	A	Q	Q	C	E	G	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	P	E	.	.	.	.	.	.	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	K	V
Query Conservation																																																									.	.	.	.	.	.
Alig confidence		.	.	.																							.	.																													.	.	.	.	.	.
Template Conservation		.	.	.																							.	.
Template Sequence		.	.	.	V	N	P	Y	R	I	E	G	Q	K	T	A	A	F	E	I	C	D	T	L	G	E	.	.	A	P	D	Y	H	F	I	P	V	G	N	A	G	N	I	T	A	Y	W	K	G	F	K	I	Y	Y	E	E	G	K	I	T	K	L	P	R	M	M	G	W	Q	A	E	G	A	A	P	I	V	K	G	Y	P
Template Known Secondary structure		.	.	.	T		T							T											S	S	.	.			S							S	S	S																T	T	S		S	S										G	G	G						T	S
Template Predicted Secondary structure		.	.	.																							.	.
Template SS confidence
					158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		V	N	L	Q	Q	A	I	A	K	E	L	E	L	T	A	S	A	E	.	.	.	.	I	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	I	D	G	I	S	Q	K	R	F	K	D	E
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.																																					.
Template Conservation																																																												.
Template Sequence		I	K	N	P	Q	T	I	A	T	A	I	K	I	G	N	P	Y	S	W	K	S	A	L	K	A	A	Q	E	S	G	G	K	I	D	A	V	S	D	S	E	I	L	Y	A	Y	K	L	I	A	S	T	E	G	V	F	C	E	P	.	A	S	A	A	S	V	A	G	L	I	K	L	V	R	E	G	F	F	K	G	G
Template Known Secondary structure			S	S				S		G	G	G			S	S		T	T												T																										B		G	.	G	G	G												T	T				S
Template Predicted Secondary structure																																																												.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		308	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	I	L	F	I	H	T	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	V	T	C	T	L	T	G	N
Template Known Secondary structure										B	B
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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